Optimized set of two-dimensional experiments for fast sequential assignment, secondary structure determination, and backbone fold validation of 13C/15N-labelled proteins
- 1. Institut de Biologie Structurale - Jean-Pierre Ebel, UMR5075 CNRS-CEA-UJF (France)
- 2. CEA-Grenoble, UMR 5047 CNRS-CEA-UJF, Laboratoire de Chimie et Biochimie des Centres Redox Biologiques (France)
Description
NMR experiments are presented which allow backbone resonance assignment, secondary structure identification, and in favorable cases also molecular fold topology determination from a series of two-dimensional 1H-15N HSQC-like spectra. The 1H-15N correlation peaks are frequency shifted by an amount ± ωX along the 15N dimension, where ωX is the Cα, Cβ, or Hα frequency of the same or the preceding residue. Because of the low dimensionality (2D) of the experiments, high-resolution spectra are obtained in a short overall experimental time. The whole series of seven experiments can be performed in typically less than one day. This approach significantly reduces experimental time when compared to the standard 3D-based methods. The here presented methodology is thus especially appealing in the context of high-throughput NMR studies of protein structure, dynamics or molecular interfaces
Additional details
Identifiers
Publishing Information
- Journal Title
- Journal of Biomolecular NMR
- Journal Volume
- 27
- Journal Issue
- 1
- Journal Page Range
- p. 57-67
- ISSN
- 0925-2738
INIS
- Country of Publication
- Netherlands
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 39109523
- Subject category
- S60: APPLIED LIFE SCIENCES;
- Descriptors DEI
- CARBON 13; HYDROGEN 1; MOLECULAR STRUCTURE; NITROGEN 15; NUCLEAR MAGNETIC RESONANCE; PROTEIN STRUCTURE; PROTEINS; SPECTRA
- Descriptors DEC
- CARBON ISOTOPES; EVEN-ODD NUCLEI; HYDROGEN ISOTOPES; ISOTOPES; LIGHT NUCLEI; MAGNETIC RESONANCE; NITROGEN ISOTOPES; NUCLEI; ODD-EVEN NUCLEI; ORGANIC COMPOUNDS; RESONANCE; STABLE ISOTOPES
Optional Information
- Copyright
- Copyright (c) 2003 Kluwer Academic Publishers