Published September 2003 | Version v1
Journal article

Optimized set of two-dimensional experiments for fast sequential assignment, secondary structure determination, and backbone fold validation of 13C/15N-labelled proteins

  • 1. Institut de Biologie Structurale - Jean-Pierre Ebel, UMR5075 CNRS-CEA-UJF (France)
  • 2. CEA-Grenoble, UMR 5047 CNRS-CEA-UJF, Laboratoire de Chimie et Biochimie des Centres Redox Biologiques (France)

Description

NMR experiments are presented which allow backbone resonance assignment, secondary structure identification, and in favorable cases also molecular fold topology determination from a series of two-dimensional 1H-15N HSQC-like spectra. The 1H-15N correlation peaks are frequency shifted by an amount ± ωX along the 15N dimension, where ωX is the Cα, Cβ, or Hα frequency of the same or the preceding residue. Because of the low dimensionality (2D) of the experiments, high-resolution spectra are obtained in a short overall experimental time. The whole series of seven experiments can be performed in typically less than one day. This approach significantly reduces experimental time when compared to the standard 3D-based methods. The here presented methodology is thus especially appealing in the context of high-throughput NMR studies of protein structure, dynamics or molecular interfaces

Additional details

Identifiers

Publishing Information

Journal Title
Journal of Biomolecular NMR
Journal Volume
27
Journal Issue
1
Journal Page Range
p. 57-67
ISSN
0925-2738

INIS

Country of Publication
Netherlands
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
39109523
Subject category
S60: APPLIED LIFE SCIENCES;
Descriptors DEI
CARBON 13; HYDROGEN 1; MOLECULAR STRUCTURE; NITROGEN 15; NUCLEAR MAGNETIC RESONANCE; PROTEIN STRUCTURE; PROTEINS; SPECTRA
Descriptors DEC
CARBON ISOTOPES; EVEN-ODD NUCLEI; HYDROGEN ISOTOPES; ISOTOPES; LIGHT NUCLEI; MAGNETIC RESONANCE; NITROGEN ISOTOPES; NUCLEI; ODD-EVEN NUCLEI; ORGANIC COMPOUNDS; RESONANCE; STABLE ISOTOPES

Optional Information

Copyright
Copyright (c) 2003 Kluwer Academic Publishers