Published February 22, 2019
| Version v1
Journal article
Chromatin remodelers as active Brownian dimers
Creators
- 1. University of Lille, UGSF CNRS UMR8576, 59000 Lille (France)
- 2. Institute Lorentz for Theoretical Physics, Leiden University, Niels Bohrweg 2, 2333 CA Leiden (Netherlands)
Description
Chromatin remodelers are molecular motors which actively displace nucleosomes on chromatin. Recent results on the structural properties of these motors indicate that the displacement of nucleosomal DNA corresponds to an inchworm motion induced by the generation and propagation of twist defects. Here we show that this basic action mechanism can be described by a coarse-grained active Brownian dimer (ABD) model, thereby quantitatively rationalizing the notion of inchworm motion. The model allows for extensions to more microscopic as well towards more macroscopic descriptions of chromatin hydrodynamics. (paper)
Availability note (English)
Available from http://dx.doi.org/10.1088/1751-8121/aafea0Additional details
Identifiers
Publishing Information
- Journal Title
- Journal of Physics. A, Mathematical and Theoretical (Online)
- Journal Volume
- 52
- Journal Issue
- 8
- Journal Page Range
- [7 p.]
- ISSN
- 1751-8121
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 52025574
- Subject category
- S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
- Descriptors DEI
- BIOPHYSICS; DEFECTS; DIMERS; DNA; HYDRODYNAMICS; NUCLEOSOMES; SIMULATION
- Descriptors DEC
- CHROMATIN; FLUID MECHANICS; MECHANICS; NUCLEIC ACIDS; ORGANIC COMPOUNDS; PHYSICS