Crystallization and preliminary X-ray diffraction analysis of mouse galectin-4 N-terminal carbohydrate recognition domain in complex with lactose
Creators
- 1. Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Flemingovo nám. 2, 166 37 Praha 6 (Czech Republic)
- 2. Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic, Flemingovo nám. 2, 166 10 Praha 6 (Czech Republic)
Description
Mouse galectin-4 carbohydrate binding domain was overexpressed in E. coli and crystallized in the presence of lactose. The crystals belong to tetragonal space group P4212 and diffraction data were collected to 2.1 Å resolution. Galectin-4 is thought to play a role in the process of tumour conversion of cells of the alimentary tract and the breast tissue; however, its exact function remains unknown. With the aim of elucidating the structural basis of mouse galectin-4 (mGal-4) binding specificity, we have undertaken X-ray analysis of the N-terminal domain, CRD1, of mGal-4 in complex with lactose (the basic building block of known galectin-4 carbohydrate ligands). Crystals of CRD1 in complex with lactose were obtained using vapour-diffusion techniques. The crystals belong to tetragonal space group P4212 with unit-cell parameters a = 91.1, b = 91.16, c = 57.10 Å and preliminary X-ray diffraction data were collected to 3.2 Å resolution. An optimized crystallization procedure and cryocooling protocol allowed us to extend resolution to 2.1 Å. Structure refinement is currently under way; the initial electron-density maps clearly show non-protein electron density in the vicinity of the carbohydrate binding site, indicating the presence of one lactose molecule. The structure will help to improve understanding of the binding specificity and function of the potential colon cancer marker galectin-4
Availability note (English)
Available from http://dx.doi.org/10.1107/S1744309108017405; Available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2443957Additional details
Identifiers
- URL
- http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2443957;
- DOI
- 10.1107/S1744309108017405;
- PII
- S1744309108017405;
Publishing Information
- Journal Title
- Acta Crystallographica. Section F
- Journal Volume
- 64
- Journal Issue
- Pt 7
- Journal Page Range
- p. 665-667
- ISSN
- 1744-3091
- CODEN
- ACSFCL
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 46065860
- Subject category
- S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
- Descriptors DEI
- CONVERSION; CRYSTALLIZATION; CRYSTALS; DENSITY; DIFFUSION; ELECTRON DENSITY; LIGANDS; MOLECULES; NEOPLASMS; POTENTIALS; RESOLUTION; SPACE GROUPS; SPECIFICITY; X-RAY DIFFRACTION
- Descriptors DEC
- COHERENT SCATTERING; DIFFRACTION; DISEASES; PHASE TRANSFORMATIONS; PHYSICAL PROPERTIES; SCATTERING; SYMMETRY GROUPS
Optional Information
- Copyright
- Copyright (c) International Union of Crystallography 2008
- Notes
- PMCID: PMC2443957; PMID: 18607104; PUBLISHER-ID: bw5225; OAI: oai:pubmedcentral.nih.gov:2443957