Published April 2018 | Version v1
Journal article

Nonadiabatic one-electron transfer mechanism for the O–O bond formation in the oxygen-evolving complex of photosystem II

  • 1. Center for Computational Sciences, University of Tsukuba, Tennodai 1-1-1, Tsukuba 305-8577 (Japan)
  • 2. Graduate School of Natural Science and Technology, Faculty of Science, Okayama University, Okayama 700-8530 (Japan)
  • 3. Riken Advanced Institute for Computational Science, Kobe, Hyogo 650-0047 (Japan)
  • 4. Handairigaku Techno-Research (NPO), Toyonaka, Osaka 560-0043 (Japan)
  • 5. Institute for NanoScience Design, Osaka University, Toyonaka, Osaka 560-8531 (Japan)

Description

Highlights: • New O–O bond formation mechanism of photosystem II oxygen-evolving complex is proposed. • At least five reaction steps were required in the S4 to S0 transition. • Initial proton transfer requires a highest activation barrier among the five reaction steps. • O–O single bond is formed by a nonadiabatic one-electron transfer from the Mn cluster to Yz. • Proton transfer occurs to neutralize the Yz anion. The reaction mechanism of the O2 formation in the S4 state of the oxygen-evolving complex of photosystem II was clarified at the quantum mechanics/molecular mechanics (QM/MM) level. After the Yz (Y161) oxidation and the following proton transfer in the S3 state, five reaction steps are required to produce the molecular dioxygen. The highest barrier step is the first proton transfer reaction (0 → 1). The following reactions involving electron transfers were precisely analyzed in terms of their energies, structures and spin densities. We found that the one-electron transfer from the Mn4Ca cluster to Y161 triggers the O–O sigma bond formation.

Availability note (English)

Available from http://dx.doi.org/10.1016/j.cplett.2018.02.056

Additional details

Identifiers

DOI
10.1016/j.cplett.2018.02.056;
PII
S0009261418301477;

Publishing Information

Journal Title
Chemical Physics Letters
Journal Volume
698
Journal Page Range
p. 138-146
ISSN
0009-2614
CODEN
CHPLBC

INIS

Country of Publication
Netherlands
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
54069275
Subject category
S74: ATOMIC AND MOLECULAR PHYSICS;
Descriptors DEI
ANIONS; ELECTRON TRANSFER; OXYGEN; PROTONS; QUANTUM MECHANICS; SPIN; TRANSFER REACTIONS
Descriptors DEC
ANGULAR MOMENTUM; BARYONS; CHARGED PARTICLES; DIRECT REACTIONS; ELEMENTARY PARTICLES; ELEMENTS; FERMIONS; HADRONS; IONS; MECHANICS; NONMETALS; NUCLEAR REACTIONS; NUCLEONS; PARTICLE PROPERTIES

Optional Information

Copyright
Copyright (c) 2018 Elsevier B.V. All rights reserved.