Published May 2009 | Version v1
Journal article

Dependence of adenine isolation efficiency on the chain length evidenced using paramagnetic particles and voltammetry measurements

  • 1. Department of Chemistry and Biochemistry, Faculty of Agronomy, Mendel University of Agriculture and Forestry, Zemedelska 1, CZ-613 00 Brno (Czech Republic)
  • 2. Department of Animal Nutrition and Forage Production, Faculty of Agronomy, Mendel University of Agriculture and Forestry, Zemedelska 1, CZ-613 00 Brno (Czech Republic)
  • 3. Department of Chemistry, Faculty of Science, Masaryk University, Kamenice 5, CZ-625 00 Brno (Czech Republic)

Description

The main aim of this work was to study the dependence of oligoadenine isolation efficiency on the chain length by using paramagnetic particles covered by homo-deoxythymidines ((dT)25) with subsequent detection by adsorptive transfer technique coupled with square wave voltammetry. For this purpose, the oligonucleotides of the length A5, A10, A15, A20, A25, A30, A35, A40 and poly(A) in various concentrations were chosen. We determined that the isolation efficiency defined as 'isolated oligonucleotide concentration'/'given oligonucleotide concentration' was about 55% on average. Sequence A25 demonstrated the best binding onto microparticles surface.

Availability note (English)

Available from http://dx.doi.org/10.1016/j.jmmm.2009.02.052

Additional details

Identifiers

DOI
10.1016/j.jmmm.2009.02.052;
PII
S0304-8853(09)00134-6;

Publishing Information

Journal Title
Journal of Magnetism and Magnetic Materials
Journal Volume
321
Journal Issue
10
Journal Page Range
p. 1474-1477
ISSN
0304-8853
CODEN
JMMMDC

Conference

Title
7. international conference on the scientific and clinical applications of magnetic carriers
Dates
21-24 May 2008
Place
Vancouver (Canada)

INIS

Country of Publication
Netherlands
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
41009662
Subject category
S77: NANOSCIENCE AND NANOTECHNOLOGY;
Resource subtype / Literary indicator
Conference
Descriptors DEI
ADENINES; MICROSTRUCTURE; NUCLEOSIDES; OLIGONUCLEOTIDES; PARAMAGNETISM; PARTICLES; PYRIMIDINES; STRIPPING; VOLTAMETRY
Descriptors DEC
AMINES; ANTIMETABOLITES; AROMATICS; AZAARENES; AZINES; DIRECT REACTIONS; DNA; DRUGS; HETEROCYCLIC COMPOUNDS; MAGNETISM; NUCLEAR REACTIONS; NUCLEIC ACIDS; NUCLEOTIDES; ORGANIC COMPOUNDS; ORGANIC NITROGEN COMPOUNDS; PURINES; RIBOSIDES; TRANSFER REACTIONS

Optional Information

Copyright
Copyright (c) 2009 Elsevier Science B.V., Amsterdam, The Netherlands, All rights reserved.