Published September 1, 2010
| Version v1
Journal article
Using a one-dimensional lattice applied to the thermodynamic study of DNA
Creators
- 1. Sao Paulo State University - UNESP, Instituto de Biociencias, Letras e Ciencias Exatas, Rua Cristovao Colombo, 2265, CEP 15054-000, Sao Jose do Rio Preto, SP (Brazil)
Description
In this work it is analyzed a one-dimensional lattice which is composed by mass-spring systems with one additional Rosen-Morse potential on site. This kind of lattice is used to study thermodynamic properties of DNA, especially its thermal denaturation. On the context of this work, the Rosen-Morse potential simulates hydrogen bonds between double strands of the molecule. From the graphic of the average stretching of base pairs versus temperature it is possible to observe the thermal denaturation of the system. This result shows that it is possible to obtain phase transition with an asymmetric potential without an infinite barrier.
Availability note (English)
Available from http://dx.doi.org/10.1088/1742-6596/246/1/012037Additional details
Identifiers
Publishing Information
- Journal Title
- Journal of Physics. Conference Series (Online)
- Journal Volume
- 246
- Journal Issue
- 1
- Journal Page Range
- [6 p.]
- ISSN
- 1742-6596
Conference
- Title
- 15. Latin American workshop on nonlinear phenomena
- Dates
- 5-9 Oct 2009
- Place
- Buzios, RJ (Brazil)
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 42053900
- Subject category
- S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY; S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
- Resource subtype / Literary indicator
- Conference
- Descriptors DEI
- ASYMMETRY; CHEMICAL BONDS; DNA; MASS; MOLECULES; MORSE POTENTIAL; ONE-DIMENSIONAL CALCULATIONS; PHASE TRANSFORMATIONS; TEMPERATURE DEPENDENCE; THERMODYNAMIC PROPERTIES
- Descriptors DEC
- NUCLEIC ACIDS; ORGANIC COMPOUNDS; PHYSICAL PROPERTIES; POTENTIALS