Published June 1, 2021 | Version v1
Journal article

Improved neuronal ensemble inference with generative model and MCMC

  • 1. Department of Mechanical Systems Engineering, Graduate School of Science and Engineering, Ibaraki University, Hitachi, Ibaraki 316-8511 (Japan)
  • 2. Department of Neurochemistry, Graduate School of Medicine, The University of Tokyo, Bunkyo-ku, Tokyo 113-0033 (Japan)

Description

Neuronal ensemble inference is a significant problem in the study of biological neural networks. Various methods have been proposed for ensemble inference from experimental data of neuronal activity. Among them, Bayesian inference approach with generative model was proposed recently. However, this method requires large computational cost for appropriate inference. In this work, we give an improved Bayesian inference algorithm by modifying update rule in Markov chain Monte Carlo method and introducing the idea of simulated annealing for hyperparameter control. We compare the performance of ensemble inference between our algorithm and the original one, and discuss the advantage of our method. (paper)

Availability note (English)

Available from http://dx.doi.org/10.1088/1742-5468/abffd5

Additional details

Identifiers

Publishing Information

Journal Title
Journal of Statistical Mechanics
Journal Volume
2021
Journal Issue
6
Journal Page Range
[22 p.]
ISSN
1742-5468

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
53083297
Subject category
S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
Resource subtype / Literary indicator
Numerical Data
Descriptors DEI
ALGORITHMS; BAYESIAN STATISTICS; COMPARATIVE EVALUATIONS; EXPERIMENTAL DATA; MARKOV PROCESS; MONTE CARLO METHOD; NEURAL NETWORKS; PERFORMANCE; SIMULATION
Descriptors DEC
CALCULATION METHODS; DATA; EVALUATION; INFORMATION; MATHEMATICAL LOGIC; MATHEMATICS; NUMERICAL DATA; STATISTICS; STOCHASTIC PROCESSES