Published June 1, 2021
| Version v1
Journal article
Improved neuronal ensemble inference with generative model and MCMC
Creators
- 1. Department of Mechanical Systems Engineering, Graduate School of Science and Engineering, Ibaraki University, Hitachi, Ibaraki 316-8511 (Japan)
- 2. Department of Neurochemistry, Graduate School of Medicine, The University of Tokyo, Bunkyo-ku, Tokyo 113-0033 (Japan)
Description
Neuronal ensemble inference is a significant problem in the study of biological neural networks. Various methods have been proposed for ensemble inference from experimental data of neuronal activity. Among them, Bayesian inference approach with generative model was proposed recently. However, this method requires large computational cost for appropriate inference. In this work, we give an improved Bayesian inference algorithm by modifying update rule in Markov chain Monte Carlo method and introducing the idea of simulated annealing for hyperparameter control. We compare the performance of ensemble inference between our algorithm and the original one, and discuss the advantage of our method. (paper)
Availability note (English)
Available from http://dx.doi.org/10.1088/1742-5468/abffd5Additional details
Identifiers
Publishing Information
- Journal Title
- Journal of Statistical Mechanics
- Journal Volume
- 2021
- Journal Issue
- 6
- Journal Page Range
- [22 p.]
- ISSN
- 1742-5468
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 53083297
- Subject category
- S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
- Resource subtype / Literary indicator
- Numerical Data
- Descriptors DEI
- ALGORITHMS; BAYESIAN STATISTICS; COMPARATIVE EVALUATIONS; EXPERIMENTAL DATA; MARKOV PROCESS; MONTE CARLO METHOD; NEURAL NETWORKS; PERFORMANCE; SIMULATION
- Descriptors DEC
- CALCULATION METHODS; DATA; EVALUATION; INFORMATION; MATHEMATICAL LOGIC; MATHEMATICS; NUMERICAL DATA; STATISTICS; STOCHASTIC PROCESSES