Optimizing resolution in multidimensional NMR by three-way decomposition
- 1. Swedish NMR Centre at Goeteborg University (Sweden)
- 2. Saarbruecken University, Mathematical Department (Germany)
- 3. Goeteborg University, Biochemistry and Biophysics (Sweden)
Description
Resolution depends on the number of points sampled in a FID; in indirectly detected dimensions it is an important determinant of the total experiment time. Based on the high redundancy present in NMR data, we propose the following timesaving scheme for three-dimensional spectra. An extensive grid of discrete t1- and t2-values is used, which increases resolution while preserving the spectral width. Total experiment time is reduced by avoiding the recording of t3-FIDs for selected pairs of t1 and t2; typically the recording is omitted for about 75% of the (t1,t2) combinations. These data sets are referred to as sparse, and post-experimental processing making optimal use of spectral redundancy provides the missing, non-recorded data. We have previously shown that three-way decomposition (TWD) within the MUNIN approach provides a practical way to process dense NMR data sets. Here, a novel TWD algorithm [Ibraghimov, (2002) Numer. Linear Algebra Appl.9, 551-565] is used to complement a sparsely recorded time-domain data set by providing the missing FIDs for all (t1,t2) combinations omitted in the experiment. A necessary condition is that for each t1-value at least a few FIDs are recorded, and similar for each t2-value. The method is demonstrated on non-uniformly sampled 15N-NOESY-HSQC data sets recorded for the 14 kD protein azurin. The spectra obtained by TWD, reconstruction and ordinary transform to frequency-domain are, in spite of the large number of signals and the high dynamic range typical for NOESYs, highly similar to a corresponding reference spectrum, for which all (t1,t2) combinations were recorded
Additional details
Identifiers
Publishing Information
- Journal Title
- Journal of Biomolecular NMR
- Journal Volume
- 27
- Journal Issue
- 2
- Journal Page Range
- p. 165-173
- ISSN
- 0925-2738
INIS
- Country of Publication
- Netherlands
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 39109516
- Subject category
- S60: APPLIED LIFE SCIENCES;
- Descriptors DEI
- ALGORITHMS; DECOMPOSITION; NITROGEN 15; NUCLEAR MAGNETIC RESONANCE; OPTIMIZATION; RESOLUTION; SPECTRA
- Descriptors DEC
- CHEMICAL REACTIONS; ISOTOPES; LIGHT NUCLEI; MAGNETIC RESONANCE; MATHEMATICAL LOGIC; NITROGEN ISOTOPES; NUCLEI; ODD-EVEN NUCLEI; RESONANCE; STABLE ISOTOPES
Optional Information
- Copyright
- Copyright (c) 2003 Kluwer Academic Publishers