Published October 2003 | Version v1
Journal article

Optimizing resolution in multidimensional NMR by three-way decomposition

  • 1. Swedish NMR Centre at Goeteborg University (Sweden)
  • 2. Saarbruecken University, Mathematical Department (Germany)
  • 3. Goeteborg University, Biochemistry and Biophysics (Sweden)

Description

Resolution depends on the number of points sampled in a FID; in indirectly detected dimensions it is an important determinant of the total experiment time. Based on the high redundancy present in NMR data, we propose the following timesaving scheme for three-dimensional spectra. An extensive grid of discrete t1- and t2-values is used, which increases resolution while preserving the spectral width. Total experiment time is reduced by avoiding the recording of t3-FIDs for selected pairs of t1 and t2; typically the recording is omitted for about 75% of the (t1,t2) combinations. These data sets are referred to as sparse, and post-experimental processing making optimal use of spectral redundancy provides the missing, non-recorded data. We have previously shown that three-way decomposition (TWD) within the MUNIN approach provides a practical way to process dense NMR data sets. Here, a novel TWD algorithm [Ibraghimov, (2002) Numer. Linear Algebra Appl.9, 551-565] is used to complement a sparsely recorded time-domain data set by providing the missing FIDs for all (t1,t2) combinations omitted in the experiment. A necessary condition is that for each t1-value at least a few FIDs are recorded, and similar for each t2-value. The method is demonstrated on non-uniformly sampled 15N-NOESY-HSQC data sets recorded for the 14 kD protein azurin. The spectra obtained by TWD, reconstruction and ordinary transform to frequency-domain are, in spite of the large number of signals and the high dynamic range typical for NOESYs, highly similar to a corresponding reference spectrum, for which all (t1,t2) combinations were recorded

Additional details

Identifiers

Publishing Information

Journal Title
Journal of Biomolecular NMR
Journal Volume
27
Journal Issue
2
Journal Page Range
p. 165-173
ISSN
0925-2738

INIS

Country of Publication
Netherlands
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
39109516
Subject category
S60: APPLIED LIFE SCIENCES;
Descriptors DEI
ALGORITHMS; DECOMPOSITION; NITROGEN 15; NUCLEAR MAGNETIC RESONANCE; OPTIMIZATION; RESOLUTION; SPECTRA
Descriptors DEC
CHEMICAL REACTIONS; ISOTOPES; LIGHT NUCLEI; MAGNETIC RESONANCE; MATHEMATICAL LOGIC; NITROGEN ISOTOPES; NUCLEI; ODD-EVEN NUCLEI; RESONANCE; STABLE ISOTOPES

Optional Information

Copyright
Copyright (c) 2003 Kluwer Academic Publishers