Published November 1, 2013 | Version v1
Journal article

Numerical model of protein crystal growth in a diffusive field such as the microgravity environment

  • 1. Confocal Science Inc., Hayakawa 2nd Building 7F, 2-12-2 Iwamoto-cho, Chiyoda-ku, Tokyo 101-0032 (Japan)
  • 2. Neo Force, 5-9-14-403 Tsurumaki, Setagaya-ku, Tokyo 154-0016 (Japan)
  • 3. Maruwa Foods and Biosciences Inc., 170-1 Tsutsui-cho, Yamatokoriyama, Nara 639-1123 (Japan)
  • 4. Japan Aerospace Exploration Agency, 2-1-1 Sengen, Tsukuba, Ibaraki 305-8505 (Japan)

Description

Numerical analysis of the concentration depletion zones in a transient state suggested that, in microgravity, protein crystals grow in a lower supersaturation and the impurity ratio decreases in the centre of the crystal. It is said that the microgravity environment positively affects the quality of protein crystal growth. The formation of a protein depletion zone and an impurity depletion zone due to the suppression of convection flow were thought to be the major reasons. In microgravity, the incorporation of molecules into a crystal largely depends on diffusive transport, so the incorporated molecules will be allocated in an orderly manner and the impurity uptake will be suppressed, resulting in highly ordered crystals. Previously, these effects were numerically studied in a steady state using a simplified model and it was determined that the combination of the diffusion coefficient of the protein molecule (D) and the kinetic constant for the protein molecule (β) could be used as an index of the extent of these depletion zones. In this report, numerical analysis of these depletion zones around a growing crystal in a non-steady (i.e. transient) state is introduced, suggesting that this model may be used for the quantitative analysis of these depletion zones in the microgravity environment

Availability note (English)

Available from http://dx.doi.org/10.1107/S0909049513022784; Available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3795573

Additional details

Publishing Information

Journal Title
Journal of Synchrotron Radiation
Journal Volume
20
Journal Issue
Pt 6
Journal Page Range
p. 1003-1009
ISSN
0909-0495
CODEN
JSYRES

INIS

Country of Publication
Denmark
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
47002169
Subject category
S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
Descriptors DEI
CRYSTAL GROWTH; ENVIRONMENT; IMPURITIES; INHIBITION; MOLECULES; NUMERICAL ANALYSIS; PROTEINS; TRANSIENTS; ZONES
Descriptors DEC
MATHEMATICS; ORGANIC COMPOUNDS

Optional Information

Copyright
Copyright (c) Hiroaki Tanaka et al. 2013
Notes
PMCID: PMC3795573; PMID: 24121357; PUBLISHER-ID: ys5099; OAI: oai:pubmedcentral.nih.gov:3795573; This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.