Published October 28, 2006 | Version v1
Journal article

Probing biopolymer conformation by metallization with noble metals

  • 1. Spatio-Temporal Order Project, ICORP, JST (Japan)
  • 2. Department of Physics, Graduate School of Science, Kyoto University, Sakyo-ku, Kyoto 608-8501 (Japan)

Description

We propose a novel method for the simple visual (colorimetric) and spectroscopic monitoring of the conformational state of a biopolymer. We present an experimental example of the detection of the change in the conformation of a giant DNA molecule. This methodology is based on the difference in the manner of metallization with noble metals on a polymer scaffold depending on its conformation. Spectroscopic analysis of the metallization of DNA by metallic silver or gold provides information on the critical concentration of DNA binder, at which the folding transition from the elongated into the compact state occurs, together with the dimension and morphology of a compact DNA condensate. This method may be suitable for use in a rapid screening procedure for the high-throughput analysis of large chemical libraries to evaluate their ability to induce DNA compaction, protein folding and similar important processes

Availability note (English)

Available online at http://stacks.iop.org/0957-4484/17/5224/nano6_20_030.pdf or at the Web site for the journal Nanotechnology (Print) (ISSN 1361-6528 ) http://www.iop.org/

Additional details

Publishing Information

Journal Title
Nanotechnology (Print)
Journal Volume
17
Journal Issue
20
Journal Page Range
p. 5224-5232
ISSN
0957-4484

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
38010779
Subject category
S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
Descriptors DEI
CONDENSATES; DNA; GOLD; MOLECULES; MORPHOLOGY; POLYMERS; SILVER
Descriptors DEC
ELEMENTS; METALS; NUCLEIC ACIDS; ORGANIC COMPOUNDS; TRANSITION ELEMENTS