Published October 31, 2015 | Version v1
Journal article

MeshAndCollect: an automated multi-crystal data-collection workflow for synchrotron macromolecular crystallography beamlines

  • 1. European Synchrotron Radiation Facility, CS 40220, 38043 Grenoble (France)
  • 2. European Molecular Biology Laboratory, Hamburg Outstation, Notkestrasse 85, 22607 Hamburg (Germany)
  • 3. Université Grenoble Alpes–EMBL–CNRS, 38042 Grenoble (France)
  • 4. European Molecular Biology Laboratory, Grenoble Outstation, 71 Avenue des Martyrs, CS 90181, 38042 Grenoble (France)
  • 5. Moscow Institute of Physics and Technology, Dolgoprudniy 141700 (Russian Federation)
  • 6. Institute of Complex Systems (ICS), Research Centre Juelich, 52425 Juelich (Germany)
  • 7. CEA, IBS, 38044 Grenoble (France)
  • 8. CNRS, IBS, 38044 Grenoble (France)
  • 9. Université Grenoble Alpes, IBS, 38044 Grenoble (France)

Description

The fully automated collection and merging of partial data sets from a series of cryocooled crystals of biological macromolecules contained on the same support is presented, as are the results of test experiments carried out on various systems. Here, an automated procedure is described to identify the positions of many cryocooled crystals mounted on the same sample holder, to rapidly predict and rank their relative diffraction strengths and to collect partial X-ray diffraction data sets from as many of the crystals as desired. Subsequent hierarchical cluster analysis then allows the best combination of partial data sets, optimizing the quality of the final data set obtained. The results of applying the method developed to various systems and scenarios including the compilation of a complete data set from tiny crystals of the membrane protein bacteriorhodopsin and the collection of data sets for successful structure determination using the single-wavelength anomalous dispersion technique are also presented

Availability note (English)

Available from http://dx.doi.org/10.1107/S1399004715017927; Available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4631482

Additional details

Publishing Information

Journal Title
Acta Crystallographica. Section D: Biological Crystallography
Journal Volume
71
Journal Issue
Pt 11
Journal Page Range
p. 2328-2343
ISSN
0907-4449
CODEN
ABCRE6

INIS

Country of Publication
Denmark
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
47085908
Subject category
S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
Descriptors DEI
CRYSTALLIZATION; CRYSTALLOGRAPHY; CRYSTALS; SYNCHROTRONS; X-RAY DIFFRACTION
Descriptors DEC
ACCELERATORS; COHERENT SCATTERING; CYCLIC ACCELERATORS; DIFFRACTION; PHASE TRANSFORMATIONS; SCATTERING

Optional Information

Copyright
Copyright (c) Zander et al. 2015
Notes
PMCID: PMC4631482; PMID: 26527148; PUBLISHER-ID: tz5083; OAI: oai:pubmedcentral.nih.gov:4631482; This is an open-access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.