Published July 7, 2015 | Version v1
Journal article

First assembly times and equilibration in stochastic coagulation-fragmentation

  • 1. Department of Mathematics, CSUN, Los Angeles, California 91330-8313 (United States)
  • 2. Department of Biomathematics, UCLA, Los Angeles, California 90095-1766 (United States)
  • 3. Institute for Computational and Engineering Sciences, University of Texas, Austin, Texas 78712-1229 (United States)
  • 4. Department of Mathematics, UCLA, Los Angeles, California 90095-1555 (United States)

Description

We develop a fully stochastic theory for coagulation and fragmentation (CF) in a finite system with a maximum cluster size constraint. The process is modeled using a high-dimensional master equation for the probabilities of cluster configurations. For certain realizations of total mass and maximum cluster sizes, we find exact analytical results for the expected equilibrium cluster distributions. If coagulation is fast relative to fragmentation and if the total system mass is indivisible by the mass of the largest allowed cluster, we find a mean cluster-size distribution that is strikingly broader than that predicted by the corresponding mass-action equations. Combinations of total mass and maximum cluster size under which equilibration is accelerated, eluding late-stage coarsening, are also delineated. Finally, we compute the mean time it takes particles to first assemble into a maximum-sized cluster. Through careful state-space enumeration, the scaling of mean assembly times is derived for all combinations of total mass and maximum cluster size. We find that CF accelerates assembly relative to monomer kinetic only in special cases. All of our results hold in the infinite system limit and can be only derived from a high-dimensional discrete stochastic model, highlighting how classical mass-action models of self-assembly can fail

Additional details

Identifiers

Publishing Information

Journal Title
Journal of Chemical Physics
Journal Volume
143
Journal Issue
1
Journal Page Range
p. 014112-014112.12
ISSN
0021-9606
CODEN
JCPSA6

INIS

Country of Publication
United States
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
47060932
Subject category
S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
Descriptors DEI
DISTRIBUTION; EQUATIONS; FRAGMENTATION; MASS; MONOMERS; PARTICLES; PROBABILITY; STOCHASTIC PROCESSES

Optional Information

Notes
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