Quantum chemical analysis of reaction indices and reaction path for drug molecules
- 1. RIKEN Center for Biosystems Dynamics Research (BDR), 6-2-4 Furuedai, Suita, Osaka 565-0874 (Japan)
Description
We performed a quantum chemical study on evaluating chemical reactivity for drug molecules in Cytochrome P450 (CYP) metabolic reaction. In this study, we focused on two insights for analysing the chemical reactivity: one is the Fukui reaction indices for a molecule, and the other is the minimum energy paths of hydrogen transition reaction between drug molecule and FeO-Porphyrin ring part on the CYP metabolic reaction. The Fukui indices are obtained numerically by using the familiar population analysis method in quantum chemical calculations. We performed the assessments of some population analyses to clarify the numerical behaviour clearly and then evaluated the potential of the reactivity of drug molecule. On the other hand, in the analysis of the minimum energy path for the CYP metabolic reaction, we performed the nudged elastic band (NEB) calculations for the hydrogen transition reaction in the first step of the CYP metabolic reaction. We report the findings for the reactivity from the Fukui indices method and also show the NEB results for the reaction paths. (paper)
Availability note (English)
Available from http://dx.doi.org/10.1088/1742-6596/1290/1/012021Additional details
Identifiers
Publishing Information
- Journal Title
- Journal of Physics. Conference Series (Online)
- Journal Volume
- 1290
- Journal Issue
- 1
- Journal Page Range
- [9 p.]
- ISSN
- 1742-6596
Conference
- Title
- 30. IUPAP Conference on Computational Physics
- Dates
- 29 Jul - 2 Aug 2018
- Place
- Davis, CA (United States)
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 53043597
- Subject category
- S37: INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY; S74: ATOMIC AND MOLECULAR PHYSICS;
- Resource subtype / Literary indicator
- Conference
- Descriptors DEI
- CHEMICAL ANALYSIS; CYTOCHROMES; DRUGS; HYDROGEN; IRON OXIDES; MOLECULES; PORPHYRINS; REACTIVITY
- Descriptors DEC
- CARBOXYLIC ACIDS; CHALCOGENIDES; ELEMENTS; HETEROCYCLIC ACIDS; HETEROCYCLIC COMPOUNDS; IRON COMPOUNDS; NONMETALS; ORGANIC ACIDS; ORGANIC COMPOUNDS; ORGANIC NITROGEN COMPOUNDS; OXIDES; OXYGEN COMPOUNDS; PIGMENTS; PROTEINS; TRANSITION ELEMENT COMPOUNDS