Tautomeric stabilities of 4-fluorohistidine shed new light on mechanistic experiments with labeled ribonuclease A
- 1. Department of Chemistry, Wichita State University, 1845 Fairmount Street, Wichita, KS, 67260-0051 (United States)
Description
Highlights: • The π-tautomer of 4-fluorohistidine is found to be predominant via MP2 and DFT calculations. • Proton transfer in 4-fluorohistidine labeled RNase A via the π-tautomer of His119 is indicated. • Tautomerization in wild-type RNase A should be considered in future mechanistic work. Ribonuclease A is the oldest model for studying enzymatic mechanisms, yet questions remain about proton transfer within the active site. Seminal work by Jackson et al. (1994) labeled Ribonuclease A with 4-fluorohistidine, concluding that active-site histidines act as general acids and bases. Calculations of 4-fluorohistidine indicate that the π-tautomer is predominant in all simulated environments (by ∼17 kJ/mol), strongly suggesting that fluoro-labeled ribonuclease A functions with His119 in π-tautomer. The tautomeric form of His119 during proton transfer and tautomerism as a putative mechanistic step in wild-type RNase A remain open questions and should be considered in future mechanistic studies.
Availability note (English)
Available from http://dx.doi.org/10.1016/j.cplett.2016.10.072Additional details
Identifiers
- DOI
- 10.1016/j.cplett.2016.10.072;
- PII
- S0009261416308570;
Publishing Information
- Journal Title
- Chemical Physics Letters
- Journal Volume
- 666
- Journal Page Range
- p. 58-61
- ISSN
- 0009-2614
- CODEN
- CHPLBC
INIS
- Country of Publication
- Netherlands
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 51123071
- Subject category
- S37: INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY; S74: ATOMIC AND MOLECULAR PHYSICS;
- Descriptors DEI
- FLUORINE COMPOUNDS; HISTIDINE; ISOMERIZATION; PROTONS; RNA-ASE
- Descriptors DEC
- AMINO ACIDS; AZOLES; BARYONS; CARBOXYLIC ACIDS; CHEMICAL REACTIONS; ELEMENTARY PARTICLES; ENZYMES; ESTERASES; FERMIONS; HADRONS; HALOGEN COMPOUNDS; HETEROCYCLIC ACIDS; HETEROCYCLIC COMPOUNDS; HYDROLASES; IMIDAZOLES; NUCLEASES; NUCLEONS; ORGANIC ACIDS; ORGANIC COMPOUNDS; ORGANIC NITROGEN COMPOUNDS; PHOSPHODIESTERASES; PROTEINS
Optional Information
- Copyright
- Copyright (c) 2016 Elsevier B.V. All rights reserved.