Purification, crystallization and preliminary X-ray analysis of rice BGlu1 β-glucosidase with and without 2-deoxy-2-fluoro-β-d-glucoside
Creators
- 1. School of Chemistry and Biochemistry, Institute of Science, Suranaree University of Technology, University Avenue, Muang District, Nakhon Ratchasima 30000 (Thailand)
- 2. Department of Biochemistry and Center for Excellence in Protein Structure and Function, Faculty of Science, Mahidol University, Rama 6 Road, Phayathai, Bangkok 10400 (Thailand)
Description
Rice BGlu1 β-glucosidase was purified from recombinant E. coli and crystallized with and without the inhibitor 2-deoxy-2-fluoro-β-d-glucose. The crystals diffracted to 2.15 and 2.75 Å, respectively. Rice (Oryza sativa) BGlu1 β-glucosidase was expressed in Escherichia coli with N-terminal thioredoxin and hexahistidine tags and purified by immobilized metal-affinity chromatography (IMAC). After removal of the N-terminal tags, cation-exchange and S-200 gel-filtration chromatography yielded a 50 kDa BGlu1 with >95% purity. The free enzyme and a complex with 2,4-dinitrophenyl-2-deoxy-2-fluoro-β-d-glucopyranoside inhibitor were crystallized by microbatch and hanging-drop vapour diffusion. Small tetragonal crystals of BGlu1 with and without inhibitor grew in 18%(w/v) PEG 8000 with 0.1 M sodium cacodylate pH 6.5 and 0.2 M zinc acetate. Crystals of BGlu1 with inhibitor were streak-seeded into 23%(w/v) PEG MME 5000, 0.2 M ammonium sulfate, 0.1 M MES pH 6.7 to yield larger crystals. Crystals with and without inhibitor diffracted to 2.15 and 2.75 Å resolution, respectively, and had isomorphous orthorhombic unit cells belonging to space group P212121
Availability note (English)
Available from http://dx.doi.org/10.1107/S1744309106027084; Available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2242908Additional details
Identifiers
- URL
- http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2242908;
- DOI
- 10.1107/S1744309106027084;
- PII
- S1744309106027084;
Publishing Information
- Journal Title
- Acta Crystallographica. Section F
- Journal Volume
- 62
- Journal Issue
- Pt 8
- Journal Page Range
- p. 798-801
- ISSN
- 1744-3091
- CODEN
- ACSFCL
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 46065447
- Subject category
- S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
- Descriptors DEI
- ACETATES; AFFINITY; AMMONIUM SULFATES; CRYSTALLIZATION; CRYSTALS; DIFFUSION; ESCHERICHIA COLI; GELS; GLUCOSE; IMPURITIES; RESOLUTION; SODIUM; SPACE GROUPS; ZINC
- Descriptors DEC
- ALDEHYDES; ALKALI METALS; AMMONIUM COMPOUNDS; BACTERIA; CARBOHYDRATES; CARBOXYLIC ACID SALTS; COLLOIDS; DISPERSIONS; ELEMENTS; HEXOSES; METALS; MICROORGANISMS; MONOSACCHARIDES; ORGANIC COMPOUNDS; OXYGEN COMPOUNDS; PHASE TRANSFORMATIONS; SACCHARIDES; SULFATES; SULFUR COMPOUNDS; SYMMETRY GROUPS
Optional Information
- Copyright
- Copyright (c) International Union of Crystallography 2006
- Notes
- PMCID: PMC2242908; PMID: 16880561; PUBLISHER-ID: bo5003; OAI: oai:pubmedcentral.nih.gov:2242908