Published November 1, 2018 | Version v1
Journal article

Duality between relaxation and first passage in reversible Markov dynamics: rugged energy landscapes disentangled

  • 1. Mathematical Biophysics Group, Max-Planck-Institute for Biophysical Chemistry, Göttingen D-37077 (Germany)

Description

Relaxation and first passage processes are the pillars of kinetics in condensed matter, polymeric and single-molecule systems. Yet, an explicit connection between relaxation and first passage time-scales so far remained elusive. Here we prove a duality between them in the form of an interlacing of spectra. In the basic form the duality holds for reversible Markov processes to effectively one-dimensional targets. The exploration of a triple-well potential is analyzed to demonstrate how the duality allows for an intuitive understanding of first passage trajectories in terms of relaxational eigenmodes. More generally, we provide a comprehensive explanation of the full statistics of reactive trajectories in rugged potentials, incl. the so-called 'few-encounter limit'. Our results are required for explaining quantitatively the occurrence of diseases triggered by protein misfolding. (fast track communication)

Availability note (English)

Available from http://dx.doi.org/10.1088/1367-2630/aaf038

Additional details

Identifiers

Publishing Information

Journal Title
New Journal of Physics
Journal Volume
20
Journal Issue
11
Journal Page Range
[11 p.]
ISSN
1367-2630

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
52035160
Subject category
S74: ATOMIC AND MOLECULAR PHYSICS;
Descriptors DEI
DUALITY; KINETICS; MARKOV PROCESS; MOLECULES; POTENTIALS; PROTEINS; RELAXATION; SPECTRA; STATISTICS
Descriptors DEC
MATHEMATICS; ORGANIC COMPOUNDS; STOCHASTIC PROCESSES