Crystallization and crystallographic analysis of the Rhodococcus rhodochrous NCIMB 13064 DhaA mutant DhaA31 and its complex with 1,2,3-trichloropropane
Creators
- 1. University of South Bohemia, Ceske Budejovice, Zamek 136, 373 33 Nove Hrady (Czech Republic)
- 2. Masaryk University, Kamenice 5/A4, 625 00 Brno (Czech Republic)
- 3. Academy of Science of the Czech Republic, Zamek 136, 373 33 Nove Hrady (Czech Republic)
Description
A mutant of the haloalkane dehalogenase DhaA (DhaA31) from R. rhodochrous NCIMB 13064 and its complex with 1,2,3-trichloropropane were crystallized and the crystals diffracted to high resolution. Haloalkane dehalogenases hydrolyze carbon–halogen bonds in a wide range of halogenated aliphatic compounds. The potential use of haloalkane dehalogenases in bioremediation applications has stimulated intensive investigation of these enzymes and their engineering. The mutant DhaA31 was constructed to degrade the anthropogenic compound 1,2,3-trichloropropane (TCP) using a new strategy. This strategy enhances activity towards TCP by decreasing the accessibility of the active site to water molecules, thereby promoting formation of the activated complex. The structure of DhaA31 will help in understanding the structure–function relationships involved in the improved dehalogenation of TCP. The mutant protein DhaA31 was crystallized by the sitting-drop vapour-diffusion technique and crystals of DhaA31 in complex with TCP were obtained using soaking experiments. Both crystals belonged to the triclinic space group P1. Diffraction data were collected to high resolution: to 1.31 Å for DhaA31 and to 1.26 Å for DhaA31 complexed with TCP
Availability note (English)
Available from http://dx.doi.org/10.1107/S1744309111001254; Available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3053171Additional details
Identifiers
- URL
- http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3053171;
- DOI
- 10.1107/S1744309111001254;
- PII
- S1744309111001254;
Publishing Information
- Journal Title
- Acta Crystallographica. Section F
- Journal Volume
- 67
- Journal Issue
- Pt 3
- Journal Page Range
- p. 397-400
- ISSN
- 1744-3091
- CODEN
- ACSFCL
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 46072783
- Subject category
- S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
- Descriptors DEI
- CARBON; CRYSTALLIZATION; CRYSTALS; DIFFRACTION; DIFFUSION; MOLECULES; POTENTIALS; RESOLUTION; SPACE GROUPS; WATER
- Descriptors DEC
- COHERENT SCATTERING; ELEMENTS; HYDROGEN COMPOUNDS; NONMETALS; OXYGEN COMPOUNDS; PHASE TRANSFORMATIONS; SCATTERING; SYMMETRY GROUPS
Optional Information
- Copyright
- Copyright (c) International Union of Crystallography 2011
- Notes
- PMCID: PMC3053171; PMID: 21393851; PUBLISHER-ID: nj5079; OAI: oai:pubmedcentral.nih.gov:3053171