Published October 25, 2013 | Version v1
Journal article

Spatially resolved NEXAFS spectroscopy of siderophores in biological matrices

  • 1. Brookhaven National Laboratory, NSLS-II, Upton, NY-11973 (United States)
  • 2. Lawrence Berkeley National Laboratory, ALS, 1 Cyclotron Road, Berkeley, CA-94720 (United States)
  • 3. University of Innsbruck, Department of Microbiology, Technikerstrasse 25, A-6020 Innsbruck (Austria)

Description

Iron is an essential nutrient for almost all forms of life. In the presence of oxygen iron is present in its ferric form which precipitates under formation of rather insoluble oxide-hydroxide polymers. Hence the bioavailability of iron is extremely low (< 10−17 M at pH 7 for Fe3+). Under such conditions almost all microorganisms synthesize siderophores as iron chelating agents, thus solubilizing ferric iron from rather insoluble iron sources. Siderophores form soluble complexes with Fe3+. The present study aims at developing a methodology that would allow for the specific detection and localization of such iron chelators in their natural environment. The applicability of spatially resolved NEXAFS spectroscopy in the soft X-ray energy (E < 1 keV) range was evaluated for localization of typical fungal hydroxamate siderophores like ferrichrome or coprogen, which can be present in various biological materials. Results obtained with the scanning transmission X-ray microscopes at beamlines 11.0.2 and 5.3.2 of the ALS have shown characteristic signatures for siderophores. Thus NEXAFS spectroscopy at the carbon K-edge, nitrogen K-edge and iron L-edge with high spatial resolution has proven to be extremely useful for their identification in their natural environment. Spectra of different siderophores as well as spectra and images of biological material containing siderophores are presented

Availability note (English)

Available from http://dx.doi.org/10.1088/1742-6596/463/1/012037

Additional details

Publishing Information

Journal Title
Journal of Physics. Conference Series (Online)
Journal Volume
463
Journal Issue
1
Journal Page Range
[4 p.]
ISSN
1742-6596

Conference

Title
11. international conference on X-ray microscopy
Acronym
XRM2012
Dates
5-10 Aug 2012
Place
Shanghai (China)

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
45015607
Subject category
S37: INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY;
Resource subtype / Literary indicator
Conference
Descriptors DEI
ABSORPTION SPECTROSCOPY; BIOLOGICAL MATERIALS; CHELATING AGENTS; FINE STRUCTURE; IRON; IRON IONS; SOFT X RADIATION; SPATIAL RESOLUTION; X-RAY SPECTROSCOPY
Descriptors DEC
CHARGED PARTICLES; ELECTROMAGNETIC RADIATION; ELEMENTS; IONIZING RADIATIONS; IONS; MATERIALS; METALS; RADIATIONS; RESOLUTION; SPECTROSCOPY; TRANSITION ELEMENTS; X RADIATION