Spatially resolved NEXAFS spectroscopy of siderophores in biological matrices
- 1. Brookhaven National Laboratory, NSLS-II, Upton, NY-11973 (United States)
- 2. Lawrence Berkeley National Laboratory, ALS, 1 Cyclotron Road, Berkeley, CA-94720 (United States)
- 3. University of Innsbruck, Department of Microbiology, Technikerstrasse 25, A-6020 Innsbruck (Austria)
Description
Iron is an essential nutrient for almost all forms of life. In the presence of oxygen iron is present in its ferric form which precipitates under formation of rather insoluble oxide-hydroxide polymers. Hence the bioavailability of iron is extremely low (< 10−17 M at pH 7 for Fe3+). Under such conditions almost all microorganisms synthesize siderophores as iron chelating agents, thus solubilizing ferric iron from rather insoluble iron sources. Siderophores form soluble complexes with Fe3+. The present study aims at developing a methodology that would allow for the specific detection and localization of such iron chelators in their natural environment. The applicability of spatially resolved NEXAFS spectroscopy in the soft X-ray energy (E < 1 keV) range was evaluated for localization of typical fungal hydroxamate siderophores like ferrichrome or coprogen, which can be present in various biological materials. Results obtained with the scanning transmission X-ray microscopes at beamlines 11.0.2 and 5.3.2 of the ALS have shown characteristic signatures for siderophores. Thus NEXAFS spectroscopy at the carbon K-edge, nitrogen K-edge and iron L-edge with high spatial resolution has proven to be extremely useful for their identification in their natural environment. Spectra of different siderophores as well as spectra and images of biological material containing siderophores are presented
Availability note (English)
Available from http://dx.doi.org/10.1088/1742-6596/463/1/012037Additional details
Identifiers
Publishing Information
- Journal Title
- Journal of Physics. Conference Series (Online)
- Journal Volume
- 463
- Journal Issue
- 1
- Journal Page Range
- [4 p.]
- ISSN
- 1742-6596
Conference
- Title
- 11. international conference on X-ray microscopy
- Acronym
- XRM2012
- Dates
- 5-10 Aug 2012
- Place
- Shanghai (China)
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 45015607
- Subject category
- S37: INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY;
- Resource subtype / Literary indicator
- Conference
- Descriptors DEI
- ABSORPTION SPECTROSCOPY; BIOLOGICAL MATERIALS; CHELATING AGENTS; FINE STRUCTURE; IRON; IRON IONS; SOFT X RADIATION; SPATIAL RESOLUTION; X-RAY SPECTROSCOPY
- Descriptors DEC
- CHARGED PARTICLES; ELECTROMAGNETIC RADIATION; ELEMENTS; IONIZING RADIATIONS; IONS; MATERIALS; METALS; RADIATIONS; RESOLUTION; SPECTROSCOPY; TRANSITION ELEMENTS; X RADIATION