Aviram–Ratner rectifying mechanism for DNA base-pair sequencing through graphene nanogaps
- 1. Department of Physics and W M Keck Computational Materials Theory Center, California State University Northridge, Northridge, CA 91330 (United States)
Description
We demonstrate that biological molecules such as Watson–Crick DNA base pairs can behave as biological Aviram–Ratner electrical rectifiers because of the spatial separation and weak hydrogen bonding between the nucleobases. We have performed a parallel computational implementation of the ab initio non-equilibrium Green's function (NEGF) theory to determine the electrical response of graphene—base-pair—graphene junctions. The results show an asymmetric (rectifying) current–voltage response for the cytosine–guanine base pair adsorbed on a graphene nanogap. In sharp contrast we find a symmetric response for the thymine–adenine case. We propose applying the asymmetry of the current–voltage response as a sensing criterion to the technological challenge of rapid DNA sequencing via graphene nanogaps. (paper)
Availability note (English)
Available from http://dx.doi.org/10.1088/0957-4484/23/13/135202Additional details
Identifiers
Publishing Information
- Journal Title
- Nanotechnology (Print)
- Journal Volume
- 23
- Journal Issue
- 13
- Journal Page Range
- [11 p.]
- ISSN
- 0957-4484
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 43100771
- Subject category
- S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS; S77: NANOSCIENCE AND NANOTECHNOLOGY;
- Descriptors DEI
- ADENINES; ASYMMETRY; CYTOSINE; DNA; DNA SEQUENCING; ELECTRIC POTENTIAL; EQUILIBRIUM; GRAPHITE; GREEN FUNCTION; GUANINE; IMPLEMENTATION; MOLECULES; NANOSTRUCTURES; RECTIFIERS; SYMMETRY; THYMINE
- Descriptors DEC
- AMINES; ANTIMETABOLITES; AROMATICS; AZAARENES; AZINES; CARBON; DRUGS; ELECTRICAL EQUIPMENT; ELEMENTS; EQUIPMENT; FUNCTIONS; HETEROCYCLIC COMPOUNDS; HYDROXY COMPOUNDS; MINERALS; NONMETALS; NUCLEIC ACIDS; ORGANIC COMPOUNDS; ORGANIC NITROGEN COMPOUNDS; ORGANIC OXYGEN COMPOUNDS; PURINES; PYRIMIDINES; STRUCTURAL CHEMICAL ANALYSIS; URACILS