CAVAREV-an open platform for evaluating 3D and 4D cardiac vasculature reconstruction
- 1. Pattern Recognition Lab, Department of Computer Science, Friedrich-Alexander University Erlangen-Nuremberg, Martensstr. 3, 91058 Erlangen (Germany)
- 2. Siemens AG, Healthcare Sector, Siemensstr. 1, 91301 Forchheim (Germany)
- 3. Computer Aided Medical Procedures and Augmented Reality, TU Muenchen, Boltzmannstr. 3, 85748 Garching (Germany)
Description
The 3D reconstruction of cardiac vasculature, e.g. the coronary arteries, using C-arm CT (rotational angiography) is an active and challenging field of research. There are numerous publications on different reconstruction techniques. However, there is still a lack of comparability of achieved results for several reasons: foremost, datasets used in publications are not open to public and thus experiments are not reproducible by other researchers. Further, the results highly depend on the vasculature motion, i.e. cardiac and breathing motion patterns which are also not comparable across publications. We aim to close this gap by providing an open platform, called Cavarev (CArdiac VAsculature Reconstruction EValuation). It features two simulated dynamic projection datasets based on the 4D XCAT phantom with contrasted coronary arteries which was derived from patient data. In the first dataset, the vasculature undergoes a continuous periodic motion. The second dataset contains aperiodic heart motion by including additional breathing motion. The geometry calibration and acquisition protocol were obtained from a real-world C-arm system. For qualitative evaluation of the reconstruction results, the correlation of the morphology is used. Two segmentation-based quality measures are introduced which allow us to assess the 3D and 4D reconstruction quality. They are based on the spatial overlap of the vasculature reconstruction with the ground truth. The measures enable a comprehensive analysis and comparison of reconstruction results independent from the utilized reconstruction algorithm. An online platform (www.cavarev.com) is provided where the datasets can be downloaded, researchers can manage and publish algorithm results and download a reference C++ and Matlab implementation.
Availability note (English)
Available from http://dx.doi.org/10.1088/0031-9155/55/10/008Additional details
Identifiers
- DOI
- 10.1088/0031-9155/55/10/008;
- PII
- S0031-9155(10)33552-4;
Publishing Information
- Journal Title
- Physics in Medicine and Biology
- Journal Volume
- 55
- Journal Issue
- 10
- Journal Page Range
- p. 2905-2915
- ISSN
- 0031-9155
- CODEN
- PHMBA7
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 42025084
- Subject category
- S62: RADIOLOGY AND NUCLEAR MEDICINE;
- Descriptors DEI
- ALGORITHMS; BIOMEDICAL RADIOGRAPHY; CORONARIES; FOUR-DIMENSIONAL CALCULATIONS; HEART; PHANTOMS; RESPIRATION; SIMULATION; THREE-DIMENSIONAL CALCULATIONS
- Descriptors DEC
- ARTERIES; BLOOD VESSELS; BODY; CARDIOVASCULAR SYSTEM; DIAGNOSTIC TECHNIQUES; MATHEMATICAL LOGIC; MEDICINE; MOCKUP; NUCLEAR MEDICINE; ORGANS; RADIOLOGY; STRUCTURAL MODELS