Published March 2010 | Version v1
Journal article

Resonant activation: a strategy against bacterial persistence

  • 1. Interdisciplinary Program of Genetics, Bioinformatics, and Computational Biology, Virginia Polytechnic Institute and State University, Blacksburg, VA 24060 (United States)
  • 2. School of Computing, Clemson University, Clemson, SC 29631 (United States)
  • 3. Department of Biological Sciences, Virginia Polytechnic Institute and State University, Blacksburg, VA 24060 (United States)

Description

A bacterial colony may develop a small number of cells genetically identical to, but phenotypically different from, other normally growing bacteria. These so-called persister cells keep themselves in a dormant state and thus are insensitive to antibiotic treatment, resulting in serious problems of drug resistance. In this paper, we proposed a novel strategy to 'kill' persister cells by triggering them to switch, in a fast and synchronized way, into normally growing cells that are susceptible to antibiotics. The strategy is based on resonant activation (RA), a well-studied phenomenon in physics where the internal noise of a system can constructively facilitate fast and synchronized barrier crossings. Through stochastic Gilliespie simulation with a generic toggle switch model, we demonstrated that RA exists in the phenotypic switching of a single bacterium. Further, by coupling single cell level and population level simulations, we showed that with RA, one can greatly reduce the time and total amount of antibiotics needed to sterilize a bacterial population. We suggest that resonant activation is a general phenomenon in phenotypic transition, and can find other applications such as cancer therapy

Availability note (English)

Available from http://dx.doi.org/10.1088/1478-3975/7/1/016013

Additional details

Identifiers

DOI
10.1088/1478-3975/7/1/016013;
PII
S1478-3975(10)37325-0;

Publishing Information

Journal Title
Physical Biology (Online)
Journal Volume
7
Journal Issue
1
Journal Page Range
[9 p.]
ISSN
1478-3975

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
44126055
Subject category
S60: APPLIED LIFE SCIENCES;
Descriptors DEI
ANTIBIOTICS; BACTERIA; COUPLING; DIFFUSION BARRIERS; NEOPLASMS; SIMULATION; STOCHASTIC PROCESSES; SWITCHES; THERAPY; VENTILATION BARRIERS
Descriptors DEC
ANTI-INFECTIVE AGENTS; DISEASES; DRUGS; ELECTRICAL EQUIPMENT; ENGINEERED SAFETY SYSTEMS; EQUIPMENT; MEDICINE; MICROORGANISMS; ORGANIC COMPOUNDS