Benchmarking PBE+D3 and SCAN+rVV10 methods using potential energy surfaces generated with MP2+ΔCCSD(T) calculation
- 1. Department of Physics, Xiamen University, Xiamen 361005 (China)
- 2. Institute of Chemical Materials, China Academy of Engineering Physics, Mianyang 621999 (China)
- 3. Department of Physics, Applied Physics, and Astronomy, Rensselaer Polytechnic Institute, Troy, New York 12180 (United States)
- 4. State Key Laboratory of High Performance Ceramics and Superfine Microstructure, Shanghai Institute of Ceramics, Chinese Academy of Sciences, Shanghai 201899 (China)
Description
We develop a benchmark system for van der Waals interactions obtained with MP2+ΔCCSD(T) method at complete basis set limit. With this benchmark, we examine the widely used PBE+D3 method and recently developed SCAN+rVV10 method for density functional theory calculations. Our benchmark is based on two molecules: glycine (or Gly, an amino acid) and uracil (or U, an RNA base). We consider six dimer configurations of the two monomers and their potential energy surfaces as a function of relative distance and rotation angle. The Gly-Gly, Gly-U, and U-U pairs represent London dispersion, hydrogen bonding, and π–π stacking interactions, respectively. Our results show that both PBE+D3 and SCAN+rVV10 methods can yield accuracy better than 1 kcal/mol, except for the cases when the distance between the two monomers is significantly smaller than the equilibrium distance. In such a case, neither of these methods can yield uniformly accurate results for all the configurations. In addition, it is found that the SCAN and SCAN+rVV10 methods can reproduce some subtle features in a rotational potential energy curve, while the PBE, PBE+D3, and the local density approximation fail. (paper)
Availability note (English)
Available from http://dx.doi.org/10.1088/1674-1056/ab5fbbAdditional details
Identifiers
Publishing Information
- Journal Title
- Chinese Physics. B
- Journal Volume
- 29
- Journal Issue
- 1
- Journal Page Range
- [6 p.]
- ISSN
- 1674-1056
INIS
- Country of Publication
- China
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 53000259
- Subject category
- S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
- Descriptors DEI
- ACCURACY; BENCHMARKS; COMPUTERIZED SIMULATION; DENSITY; DENSITY FUNCTIONAL METHOD; DISPERSIONS; DISTANCE; GLYCINE; HYDROGEN; INTERACTIONS; MOLECULES; MONOMERS; URACILS
- Descriptors DEC
- AMINO ACIDS; AZINES; CALCULATION METHODS; CARBOXYLIC ACIDS; ELEMENTS; HETEROCYCLIC COMPOUNDS; HYDROXY COMPOUNDS; NONMETALS; ORGANIC ACIDS; ORGANIC COMPOUNDS; ORGANIC NITROGEN COMPOUNDS; PHYSICAL PROPERTIES; PYRIMIDINES; SIMULATION; VARIATIONAL METHODS