Published July 2018 | Version v1
Journal article

Stable isotope labeling approaches for NMR characterization of glycoproteins using eukaryotic expression systems

  • 1. National Institutes of Natural Sciences, Institute for Molecular Science and Okazaki Institute for Integrative Bioscience (Japan)
  • 2. Nagoya City University, Graduate School of Pharmaceutical Sciences (Japan)

Description

Glycoproteins are characterized by the heterogeneous and dynamic nature of their glycan moieties, which hamper crystallographic analysis. NMR spectroscopy provides potential advantages in dealing with such complicated systems, given that the target molecules can be isotopically labeled. Methods of metabolic isotope labeling in recombinant glycoproteins have been developed recently using a variety of eukaryotic production vehicles, including mammalian, yeast, insect, and plant cells, each of which has a distinct N-glycan diversification pathway. Yeast genetic engineering has enabled the overexpression of homogeneous high-mannose-type oligosaccharides with 13C labeling for NMR characterization of their conformational dynamics. The utility of stable isotope-assisted NMR spectroscopy has also been demonstrated using the Fc fragment of immunoglobulin G (IgG) as a model glycoprotein, providing useful information regarding intramolecular carbohydrate–protein interactions. Transverse relaxation optimization of intact IgG with a molecular mass of 150 kDa has been achieved by tailored deuteration of selected amino acid residues using a mammalian expression system. This offers a useful probe for the characterization of molecular interaction networks in multimolecular crowded systems typified by serum. Perspectives regarding the development of techniques for tailoring glycoform designs and isotope labeling of recombinant glycoproteins are also discussed.

Additional details

Identifiers

Publishing Information

Journal Title
Journal of Biomolecular NMR
Journal Volume
71
Journal Issue
3
Journal Page Range
p. 193-202
ISSN
0925-2738

Conference

Title
Practical School on Advanced Isotopic Labeling Methods (AILM)
Dates
13-17 Mar 2017
Place
Grenoble (France)

INIS

Country of Publication
Netherlands
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
49100104
Subject category
S37: INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY;
Resource subtype / Literary indicator
Conference
Descriptors DEI
CARBON 13; GENETIC ENGINEERING; GLYCOPROTEINS; LABELLING; NUCLEAR MAGNETIC RESONANCE
Descriptors DEC
BIOTECHNOLOGY; CARBOHYDRATES; CARBON ISOTOPES; EVEN-ODD NUCLEI; ISOTOPES; LIGHT NUCLEI; MAGNETIC RESONANCE; NUCLEI; ORGANIC COMPOUNDS; PROTEINS; RESONANCE; SACCHARIDES; STABLE ISOTOPES

Optional Information

Copyright
Copyright (c) 2018 Springer Science+Business Media B.V., part of Springer Nature