Fully automated interpretation of ionizing radiation-induced γH2AX foci by the novel pattern recognition system AKLIDES
Creators
- 1. Department of Nuclear Medicine, Medical Faculty Carl Gustav Carus, Technische Universität Dresden, Dresden (Germany)
- 2. Department of Information Technology, Electronics and Mechanical Engineering, Lausitz University of Applied Sciences, Senftenberg (Germany)
- 3. Laboratory of Radiobiology and Experimental Oncology, University Medical Center Hamburg-Eppendorf, Hamburg (Germany)
- 4. OncoRay-Center for Radiation Research in Oncology, Dresden (Germany)
- 5. Medipan GmbH, Dahlewitz, Berlin (Germany)
- 6. Institute of Immunology, Medical Faculty Carl Gustav Carus, Technische Universität Dresden, Dresden (Germany)
Description
Purpose: Assessment of phosphorylated histone H2AX (γH2AX) foci as a measure for double-strand breaks (DSB) is a common technique. Since visual interpretation is time-consuming and influenced by subjective factors, we adapted the pattern recognition algorithms of autoantibodies to automated reading of γH2AX foci. Materials and methods: DSB formation was assessed by detection of γH2AX foci after exposition of thyreocyte rat cell line to 188Re. We used pattern recognition algorithms of the automated fluorescence interpretation system AKLIDES for evaluation of γH2AX foci. Manual investigation was performed by three laboratories involving five observers. The results were compared by determining correlation and inter-laboratory variability. Results: The study confirmed the adaptation of automated interpretation system AKLIDES to automated assessment of γH2AX foci in irradiated cells. Both manual and automated quantification resulted in increasing focus numbers depending on dose. Comparison of automated reading with visual assessment for five manual observers resulted in a determination coefficient of R2 = 0.889. The inter-laboratory variability for five manual investigators of three laboratories was 38.4 %. Conclusion: The interpretation system AKLIDES demonstrated a high correlation with visually observed results. High inter-laboratory variability found for manual investigations revealed the usefulness for a standardized technique for evaluation of γH2AX foci. (authors)
Availability note (English)
Also available at: https://doi.org/10.3109/09553002.2012.658468Additional details
Identifiers
Publishing Information
- Journal Title
- International Journal of Radiation Biology
- Journal Volume
- 88
- Journal Issue
- 5
- Journal Page Range
- p. 439-447
- ISSN
- 0955-3002
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- Argentina
- INIS RN
- 53087235
- Subject category
- S63: RADIATION, THERMAL, AND OTHER ENVIRONMENTAL POLLUTANT EFFECTS ON LIVING ORGANISMS AND BIOLOGICAL MATERIALS;
- Descriptors DEI
- ANIMAL CELLS; AUTOMATION; BIOLOGICAL RADIATION EFFECTS; DNA DAMAGES; HISTONES; INTERLABORATORY COMPARISONS; IONIZING RADIATIONS; IRRADIATION; PHOSPHORYLATION; RATS; RHENIUM 188
- Descriptors DEC
- ANIMALS; BETA DECAY RADIOISOTOPES; BETA-MINUS DECAY RADIOISOTOPES; BIOLOGICAL EFFECTS; CHEMICAL REACTIONS; HEAVY NUCLEI; HOURS LIVING RADIOISOTOPES; INTERNAL CONVERSION RADIOISOTOPES; ISOMERIC TRANSITION ISOTOPES; ISOTOPES; MAMMALS; MINUTES LIVING RADIOISOTOPES; NUCLEI; ODD-ODD NUCLEI; ORGANIC COMPOUNDS; PROTEINS; RADIATION EFFECTS; RADIATIONS; RADIOISOTOPES; RHENIUM ISOTOPES; RODENTS; VERTEBRATES