Density functional study on the binding properties of nucleobases to stanane nanosheet
- 1. School of Chemical & Biotechnology, SASTRA Deemed University, Tirumalaisamudram, Thanjavur 613 401 (India)
- 2. School of Electrical & Electronics Engineering SASTRA Deemed University, Tirumalaisamudram, Thanjavur 613 401 (India)
Description
Highlights: • The stanane nanosheets exhibit semiconducting behavior. • The modulation in the energy band gap of stanane sheets are observed upon adsorption of nucleobases. • The adsorption of cytosine is found to be significant than other nucleobases. • The transfer of charge takes place between nucleobases and stanane sheets upon adsorption. • The findings suggest that stanane nanosheet can be used for the detection of nucleobases. We report the interaction of stanane nanosheet (Sn-NS) with deoxy ribo nucleic acids (DNA)/ribo nucleic acids (RNA) utilizing density functional theory (DFT) technique. The calculated formation energy led us to conclude that Sn-NS exhibits a stable geometric structure. The energy band structure and density of states (DOS) spectrum provide the electronic characteristics of Sn-NS, and the band gap is found to be 1.73 eV, which exhibit semiconducting property. Our results confirmed the adsorption of nucleobases with stanane nanosheet, which follows the sequence C > U > A > T > G. The interaction property of nucleobases on Sn-NS material is authenticated with the Bader charge transfer, energy gap, adsorption energy and average energy gap changes. Moreover, the interaction of nucleobases on Sn-NS is also explored using the change in the DOS-spectrum, electron density diagrams and energy band structure. The findings of the current work infer that the DNA sequencing can be carried out using stanane nanosheet.
Availability note (English)
Available from http://dx.doi.org/10.1016/j.apsusc.2018.08.066Additional details
Identifiers
- DOI
- 10.1016/j.apsusc.2018.08.066;
- PII
- S0169433218321949;
Publishing Information
- Journal Title
- Applied Surface Science
- Journal Volume
- 462
- Journal Page Range
- p. 831-839
- ISSN
- 0169-4332
- CODEN
- ASUSEE
INIS
- Country of Publication
- Netherlands
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 53025807
- Subject category
- S77: NANOSCIENCE AND NANOTECHNOLOGY;
- Descriptors DEI
- ADSORPTION; DENSITY FUNCTIONAL METHOD; DENSITY OF STATES; DNA; ELECTRON DENSITY; ENERGY GAP; FORMATION HEAT; NANOSTRUCTURES; RNA; SPECTRA; TIN; TWO-DIMENSIONAL SYSTEMS
- Descriptors DEC
- CALCULATION METHODS; CRYSTAL LATTICES; CRYSTAL STRUCTURE; ELEMENTS; ENTHALPY; METALS; NUCLEIC ACIDS; ORGANIC COMPOUNDS; PHYSICAL PROPERTIES; REACTION HEAT; SORPTION; THERMODYNAMIC PROPERTIES; VARIATIONAL METHODS
Optional Information
- Copyright
- Copyright (c) 2018 Elsevier B.V. All rights reserved.