Published March 2006 | Version v1
Journal article

PR-CALC: A Program for the Reconstruction of NMR Spectra from Projections

  • 1. Duke University Medical Center, Department of Biochemistry (United States)

Description

Projection-reconstruction NMR (PR-NMR) has attracted growing attention as a method for collecting multidimensional NMR data rapidly. The PR-NMR procedure involves measuring lower-dimensional projections of a higher-dimensional spectrum, which are then used for the mathematical reconstruction of the full spectrum. We describe here the program PR-CALC, for the reconstruction of NMR spectra from projection data. This program implements a number of reconstruction algorithms, highly optimized to achieve maximal performance, and manages the reconstruction process automatically, producing either full spectra or subsets, such as regions or slices, as requested. The ability to obtain subsets allows large spectra to be analyzed by reconstructing and examining only those subsets containing peaks, offering considerable savings in processing time and storage space. PR-CALC is straightforward to use, and integrates directly into the conventional pipeline for data processing and analysis. It was written in standard C+ + and should run on any platform. The organization is flexible, and permits easy extension of capabilities, as well as reuse in new software. PR-CALC should facilitate the widespread utilization of PR-NMR in biomedical research

Additional details

Identifiers

Publishing Information

Journal Title
Journal of Biomolecular NMR
Journal Volume
34
Journal Issue
3
Journal Page Range
p. 179-195
ISSN
0925-2738

INIS

Country of Publication
Netherlands
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
39115813
Subject category
S62: RADIOLOGY AND NUCLEAR MEDICINE;
Descriptors DEI
ALGORITHMS; COMPUTER CODES; DATA PROCESSING; NMR SPECTRA; NUCLEAR MAGNETIC RESONANCE; PROTEIN STRUCTURE
Descriptors DEC
MAGNETIC RESONANCE; MATHEMATICAL LOGIC; PROCESSING; RESONANCE; SPECTRA

Optional Information

Copyright
Copyright (c) 2006 Springer