Crystallization and preliminary X-ray diffraction analysis of the N-terminal domain of human coronavirus OC43 nucleocapsid protein
Creators
- 1. Department of Life Sciences, National Chung Hsing University, Taichung 402, Taiwan (China)
- 2. National Synchrotron Radiation Research Center, Hsinchu 300, Taiwan (China)
- 3. Institute of Biological Chemistry, Academia Sinica, Taipei 115, Taiwan (China)
- 4. Institute of Chemistry, Academia Sinica, Taipei 11529, Taiwan (China)
- 5. Institute of Bioengineering, Tatung University, Taipei 104, Taiwan (China)
- 6. Institute of Genomics and Bioinformatics, National Chung Hsing University, Taichung 402, Taiwan (China)
Description
Crystals of the N-terminal domain of nucleocapsid protein from human coronavirus OC43 were obtained that diffracted X-rays to a resolution of at least 1.7 Å. The N-terminal domain of nucleocapsid protein from human coronavirus OC43 (HCoV-OC43 N-NTD) mostly contains positively charged residues and has been identified as being responsible for RNA binding during ribonucleocapsid formation in the coronavirus. In this study, the crystallization and preliminary crystallographic analysis of HCoV-OC43 N-NTD (amino acids 58–195) with a molecular weight of 20 kDa are reported. HCoV-OC43 N-NTD was crystallized at 293 K using PEG 1500 as a precipitant and a 99.9% complete native data set was collected to 1.7 Å resolution at 100 K with an overall Rmerge of 5.0%. The crystals belonged to the hexagonal space group P65, with unit-cell parameters a = 81.57, c = 42.87 Å. Solvent-content calculations suggest that there is likely to be one subunit of N-NTD in the asymmetric unit
Availability note (English)
Available from http://dx.doi.org/10.1107/S1744309110017616; Available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2898469Additional details
Identifiers
- URL
- http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2898469;
- DOI
- 10.1107/S1744309110017616;
- PII
- S1744309110017616;
Publishing Information
- Journal Title
- Acta Crystallographica. Section F
- Journal Volume
- 66
- Journal Issue
- Pt 7
- Journal Page Range
- p. 815-818
- ISSN
- 1744-3091
- CODEN
- ACSFCL
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 46072604
- Subject category
- S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
- Descriptors DEI
- CRYSTALLIZATION; CRYSTALS; MOLECULAR WEIGHT; PROTEINS; RESOLUTION; SOLVENTS; SPACE GROUPS; X-RAY DIFFRACTION
- Descriptors DEC
- COHERENT SCATTERING; DIFFRACTION; ORGANIC COMPOUNDS; PHASE TRANSFORMATIONS; SCATTERING; SYMMETRY GROUPS
Optional Information
- Copyright
- Copyright (c) International Union of Crystallography 2010
- Notes
- PMCID: PMC2898469; PMID: 20606281; PUBLISHER-ID: nj5060; OAI: oai:pubmedcentral.nih.gov:2898469