Stable and rigid DTPA-like paramagnetic tags suitable for in vitro and in situ protein NMR analysis
- 1. Nankai University, State Key Laboratory of Elemento-Organic Chemistry and Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), College of Chemistry (China)
Description
Organic synthesis of a ligand with high binding affinities for paramagnetic lanthanide ions is an effective way of generating paramagnetic effects on proteins. These paramagnetic effects manifested in high-resolution NMR spectroscopy are valuable dynamic and structural restraints of proteins and protein–ligand complexes. A paramagnetic tag generally contains a metal chelating moiety and a reactive group for protein modification. Herein we report two new DTPA-like tags, 4PS-PyDTTA and 4PS-6M-PyDTTA that can be site-specifically attached to a protein with a stable thioether bond. Both protein-tag adducts form stable lanthanide complexes, of which the binding affinities and paramagnetic tensors are tunable with respect to the 6-methyl group in pyridine. Paramagnetic relaxation enhancement (PRE) effects of Gd(III) complex on protein-tag adducts were evaluated in comparison with pseudocontact shift (PCS), and the results indicated that both 4PS-PyDTTA and 4PS-6M-PyDTTA tags are rigid and present high-quality PREs that are crucially important in elucidation of the dynamics and interactions of proteins and protein-ligand complexes. We also show that these two tags are suitable for in-situ protein NMR analysis.
Additional details
Identifiers
Publishing Information
- Journal Title
- Journal of Biomolecular NMR
- Journal Volume
- 70
- Journal Issue
- 2
- Journal Page Range
- p. 77-92
- ISSN
- 0925-2738
INIS
- Country of Publication
- Netherlands
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 49106585
- Subject category
- S37: INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY;
- Descriptors DEI
- DTPA; IN VITRO; IONS; NUCLEAR MAGNETIC RESONANCE; ORGANIC SULFUR COMPOUNDS; PARAMAGNETISM
- Descriptors DEC
- AMINO ACIDS; CARBOXYLIC ACIDS; CHARGED PARTICLES; CHELATING AGENTS; DRUGS; MAGNETIC RESONANCE; MAGNETISM; ORGANIC ACIDS; ORGANIC COMPOUNDS; RADIOPROTECTIVE SUBSTANCES; RESONANCE; RESPONSE MODIFYING FACTORS
Optional Information
- Copyright
- Copyright (c) 2018 Springer Science+Business Media B.V., part of Springer Nature