Crystallization and preliminary X-ray characterization of the Skp1–Fbg3 complex
Creators
- 1. Department of Biotechnology, Graduate School of Engineering, Nagoya University, Chikusa-ku, Nagoya 464-8603 (Japan)
- 2. Graduate School of Pharmaceutical Sciences, Nagoya City University, 3-1 Tanabe-dori, Mizuho-ku, Nagoya 467-8603 (Japan)
- 3. Department of Biophysics and Biochemistry, Graduate School of Medicine and Cell Biology and Metabolism Group, Graduate School of Frontier Biosciences, Osaka University, Suita, Osaka 565-0871 (Japan)
- 4. Laboratory of Frontier Science, Tokyo Metropolitan Institute of Medical Science, Setagaya-ku, Tokyo 156-8506 (Japan)
Description
The crystallization and preliminary X-ray diffraction studies of the Skp1–Fbg3 complex are reported. Crystallization by repeated microseeding using selected crystals as a source of microseeds is described. F-box proteins are the substrate-recognition components of Skp1–Cullin1–F-box protein–Rbx1 (SCF) ubiquitin ligase complexes. Fbs1, an F-box protein, binds specifically to proteins modified with high-mannose oligosaccharides. Fbg3, another F-box protein, has 51% sequence identity to Fbs1. Although the residues that are necessary for binding to oligosaccharides are conserved between Fbs1 and Fbg3, Fbg3 does not bind glycoproteins. Skp1 and Fbg3 were co-expressed in Escherichia coli and their complex was purified to homogeneity and crystallized. Microseeding combined with the sandwiched hanging-drop technique improved the quality of the resulting crystals. The plate-shaped crystals belonged to space group P212121, with unit-cell parameters a = 34.1, b = 76.6, c = 193.9 Å and one molecule per asymmetric unit
Availability note (English)
Available from http://dx.doi.org/10.1107/S1744309109050581; Available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2805547Additional details
Identifiers
- URL
- http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2805547;
- DOI
- 10.1107/S1744309109050581;
- PII
- S1744309109050581;
Publishing Information
- Journal Title
- Acta Crystallographica. Section F
- Journal Volume
- 66
- Journal Issue
- Pt 1
- Journal Page Range
- p. 95-98
- ISSN
- 1744-3091
- CODEN
- ACSFCL
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 46067579
- Subject category
- S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
- Descriptors DEI
- CRYSTALLIZATION; CRYSTALS; ESCHERICHIA COLI; MOLECULES; PLATES; SPACE GROUPS; SUBSTRATES; X-RAY DIFFRACTION
- Descriptors DEC
- BACTERIA; COHERENT SCATTERING; DIFFRACTION; MICROORGANISMS; PHASE TRANSFORMATIONS; SCATTERING; SYMMETRY GROUPS
Optional Information
- Copyright
- Copyright (c) International Union of Crystallography 2010
- Notes
- PMCID: PMC2805547; PMID: 20057081; PUBLISHER-ID: en5390; OAI: oai:pubmedcentral.nih.gov:2805547