Published February 1, 2017
| Version v1
Journal article
From conformational spread to allosteric and cooperative models of E. coli flagellar motor
Creators
- 1. International School for Advanced Studies (SISSA), via Bonomea 265, I-34136 Trieste (Italy)
- 2. The Abdus Salam International Centre for Theoretical Physics (ICTP), Strada Costiera 11, I-34014 Trieste (Italy)
Description
Escherichia coli swims using flagella activated by rotary motors. The direction of rotation of the motors is indirectly regulated by the binding of a single messenger protein. The conformational spread model has been shown to accurately describe the equilibrium properties as well as the dynamics of the flagellar motor. In this paper we study this model from an analytic point of view. By exploiting the separation of timescales observed in experiments, we show how to reduce the conformational spread model to a coarse-grained, cooperative binding model. We show that this simplified model reproduces very well the dynamics of the motor switch. (paper: interdisciplinary statistical mechanics)
Availability note (English)
Available from http://dx.doi.org/10.1088/1742-5468/aa569eAdditional details
Identifiers
Publishing Information
- Journal Title
- Journal of Statistical Mechanics
- Journal Volume
- 2017
- Journal Issue
- 2
- Journal Page Range
- [22 p.]
- ISSN
- 1742-5468
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 49080163
- Subject category
- S60: APPLIED LIFE SCIENCES;
- Descriptors DEI
- EQUILIBRIUM; ESCHERICHIA COLI; KINETICS; PROTEINS; ROTATION
- Descriptors DEC
- BACTERIA; MICROORGANISMS; MOTION; ORGANIC COMPOUNDS