Published February 1, 2017 | Version v1
Journal article

From conformational spread to allosteric and cooperative models of E. coli flagellar motor

  • 1. International School for Advanced Studies (SISSA), via Bonomea 265, I-34136 Trieste (Italy)
  • 2. The Abdus Salam International Centre for Theoretical Physics (ICTP), Strada Costiera 11, I-34014 Trieste (Italy)

Description

Escherichia coli swims using flagella activated by rotary motors. The direction of rotation of the motors is indirectly regulated by the binding of a single messenger protein. The conformational spread model has been shown to accurately describe the equilibrium properties as well as the dynamics of the flagellar motor. In this paper we study this model from an analytic point of view. By exploiting the separation of timescales observed in experiments, we show how to reduce the conformational spread model to a coarse-grained, cooperative binding model. We show that this simplified model reproduces very well the dynamics of the motor switch. (paper: interdisciplinary statistical mechanics)

Availability note (English)

Available from http://dx.doi.org/10.1088/1742-5468/aa569e

Additional details

Identifiers

Publishing Information

Journal Title
Journal of Statistical Mechanics
Journal Volume
2017
Journal Issue
2
Journal Page Range
[22 p.]
ISSN
1742-5468

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
49080163
Subject category
S60: APPLIED LIFE SCIENCES;
Descriptors DEI
EQUILIBRIUM; ESCHERICHIA COLI; KINETICS; PROTEINS; ROTATION
Descriptors DEC
BACTERIA; MICROORGANISMS; MOTION; ORGANIC COMPOUNDS