Published July 2009 | Version v1
Journal article

Finding hypergraph communities: a Bayesian approach and variational solution

  • 1. The Simons Center for Systems Biology, Institute for Advanced Study, Einstein Drive, Princeton, NJ 08540 (United States)

Description

Data clustering, including problems such as finding network communities, can be put into a systematic framework by means of a Bayesian approach. Here we address the Bayesian formulation of the problem of finding hypergraph communities. We start by introducing a hypergraph generative model with a built-in group structure. Using a variational calculation we derive a variational Bayes algorithm, a generalized version of the expectation maximization algorithm with a built-in penalization for model complexity or bias. We demonstrate the good performance of the variational Bayes algorithm using test examples, including finding network communities. A MATLAB code implementing this algorithm is provided as supplementary material

Availability note (English)

Available from http://dx.doi.org/10.1088/1742-5468/2009/07/P07006

Additional details

Identifiers

DOI
10.1088/1742-5468/2009/07/P07006;
PII
S1742-5468(09)17985-2;

Publishing Information

Journal Title
Journal of Statistical Mechanics
Journal Volume
2009
Journal Issue
07
Journal Page Range
[16 p.]
ISSN
1742-5468

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
45035049
Subject category
S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
Descriptors DEI
ALGORITHMS; MATHEMATICAL SOLUTIONS; PERFORMANCE; VARIATIONAL METHODS
Descriptors DEC
CALCULATION METHODS; MATHEMATICAL LOGIC