13C NMR chemical shifts can predict disulfide bond formation
Creators
- 1. University of Texas Medical Branch, Department of Human Biological Chemistry and Genetics and Sealy Center for Structural Biology (United States)
Description
The presence of disulfide bonds can be detected unambiguously only by X-ray crystallography, and otherwise must be inferred by chemical methods. In this study we demonstrate that 13C NMR chemical shifts are diagnostic of disulfide bond formation, and can discriminate between cysteine in the reduced (free) and oxidized (disulfide bonded) state. A database of cysteine 13C Cα and Cβ chemical shifts was constructed from the BMRB and Sheffield databases, and published journals. Statistical analysis indicated that the Cβ shift is extremely sensitive to the redox state, and can predict the disulfide-bonded state. Further, chemical shifts in both states occupy distinct clusters as a function of secondary structure in the Cα/Cβ chemical shift map. On the basis of these results, we provide simple ground rules for predicting the redox state of cysteines; these rules could be used effectively in NMR structure determination, predicting new folds, and in protein folding studies
Additional details
Identifiers
Publishing Information
- Journal Title
- Journal of Biomolecular NMR
- Journal Volume
- 18
- Journal Issue
- 2
- Journal Page Range
- p. 165-171
- ISSN
- 0925-2738
INIS
- Country of Publication
- Netherlands
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 39109777
- Subject category
- S60: APPLIED LIFE SCIENCES;
- Descriptors DEI
- CARBON 13; CHEMICAL SHIFT; CRYSTALLOGRAPHY; CYSTEINE; DISULFIDES; NUCLEAR MAGNETIC RESONANCE; PROTEIN STRUCTURE; PROTEINS; X RADIATION
- Descriptors DEC
- AMINO ACIDS; CARBON ISOTOPES; CARBOXYLIC ACIDS; ELECTROMAGNETIC RADIATION; EVEN-ODD NUCLEI; IONIZING RADIATIONS; ISOTOPES; LIGHT NUCLEI; MAGNETIC RESONANCE; NUCLEI; ORGANIC ACIDS; ORGANIC COMPOUNDS; ORGANIC SULFUR COMPOUNDS; RADIATIONS; RESONANCE; STABLE ISOTOPES; THIOLS
Optional Information
- Copyright
- Copyright (c) 2000 Kluwer Academic Publishers