Crystallization and preliminary X-ray diffraction analysis of Q4DV70 from Trypanosoma cruzi, a hypothetical protein with a putative thioredoxin domain
Creators
- 1. Instituto de Biologia, Universidade Estadual de Campinas (Unicamp), Campinas-SP (Brazil)
- 2. Center for Structural Molecular Biology (CeBiME), Brazilian Synchrotron Light Laboratory (LNLS), CP 6192, 13084-971 Campinas-SP (Brazil)
- 3. Instituto Carlos Chagas, Fiocruz, Curitiba-PR (Brazil)
- 4. Synchrotron SOLEIL, Saint-Aubin (France)
Description
The gene coding for Q4DV70 has been cloned and the protein overexpressed in Escherichia coli with an N-terminal His tag. Purification of Q4DV70 was carried out by affinity and size-exclusion chromatography and the His tag was removed by TEV protease digestion. Crystals of Q4DV70 were grown using the sitting-drop vapour-diffusion method. Q4DV70 is annotated in the Trypanosoma cruzi CL Brener genome as a hypothetical protein with a predicted thioredoxin-like fold, although the catalytic cysteine residues that are conserved in typical oxidoreductases are replaced by serine residues. Gene-expression analysis indicates that this protein is differentially expressed during the T. cruzi life cycle, suggesting that it plays an important role during T. cruzi development. The gene coding for Q4DV70 was cloned and the protein was overexpressed in Escherichia coli with an N-terminal His tag. Purification of Q4DV70 was carried out by affinity and size-exclusion chromatography and the His tag was removed by TEV protease digestion. Crystals of Q4DV70 were grown using the sitting-drop vapour-diffusion method. A diffraction data set was collected to 1.50 Å resolution from a single crystal grown in 25% PEG 1500, 200 mM sodium thiocyanate pH 6.9, 10 mM phenol and 10% ethylene glycol. The crystal belonged to space group P212121, with unit-cell parameters a = 35.04, b = 50.32, c = 61.18 Å. The Q4DV70 structure was solved by molecular replacement using protein disulfide isomerase from yeast as a search model. Initial refinement of the model indicated that the solution was correct. These data are being used for refinement of the model of Q4DV70
Availability note (English)
Available from http://dx.doi.org/10.1107/S1744309109017734; Available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2688432Additional details
Identifiers
- URL
- http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2688432;
- DOI
- 10.1107/S1744309109017734;
- PII
- S1744309109017734;
Publishing Information
- Journal Title
- Acta Crystallographica. Section F
- Journal Volume
- 65
- Journal Issue
- Pt 6
- Journal Page Range
- p. 641-644
- ISSN
- 1744-3091
- CODEN
- ACSFCL
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 46067427
- Subject category
- S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
- Descriptors DEI
- AFFINITY; CRYSTALLIZATION; CYSTEINE; DIFFUSION; ESCHERICHIA COLI; GLYCOLS; MATHEMATICAL SOLUTIONS; MONOCRYSTALS; PHENOL; RESOLUTION; SODIUM; SOLUTIONS; SPACE GROUPS; X-RAY DIFFRACTION
- Descriptors DEC
- ALCOHOLS; ALKALI METALS; AMINO ACIDS; AROMATICS; BACTERIA; CARBOXYLIC ACIDS; COHERENT SCATTERING; CRYSTALS; DIFFRACTION; DISPERSIONS; ELEMENTS; HOMOGENEOUS MIXTURES; HYDROXY COMPOUNDS; METALS; MICROORGANISMS; MIXTURES; ORGANIC ACIDS; ORGANIC COMPOUNDS; ORGANIC SULFUR COMPOUNDS; PHASE TRANSFORMATIONS; PHENOLS; SCATTERING; SYMMETRY GROUPS; THIOLS
Optional Information
- Copyright
- Copyright (c) International Union of Crystallography 2009
- Notes
- PMCID: PMC2688432; PMID: 19478453; PUBLISHER-ID: ll5188; OAI: oai:pubmedcentral.nih.gov:2688432