Published June 2009 | Version v1
Journal article

RNA matrix models with external interactions and their asymptotic behavior

  • 1. Department of Physics and Astrophysics, University of Delhi, Delhi 110007 (India)

Description

We study a matrix model of RNA in which an external perturbation on n nucleotides is introduced in the action of the partition function of the polymer chain. The effect of the perturbation appears in the exponential generating function of the partition function as a factor exp(1-nα/L) (where α is the ratio of strengths of the original to the perturbed term and L is the length of the chain). The asymptotic behavior of the genus distribution functions as a function of length for the matrix model with interaction is analyzed numerically for all n≤L. It is found that as nα/L is increased from 0 to 1, the term 3L in the number of diagrams aL,g,α' at a fixed length L, genus g and α, goes to 2L[(3-(nα/L))L for any nα/L] and the total number of diagrams Nα' at a fixed length L and α but independent of genus g, undergoes a change in the factor exp(√(L)) to 1 (exp[(1-nα/L)√(L)] for any nα/L). However the exponent L of the dominant length dependent term in aL,g,α' stays unchanged. Hence the universality is robust to changes in the interaction (α). The distribution functions also exhibit unusual behavior at small lengths.

Additional details

Publishing Information

Journal Title
Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics (Print)
Journal Volume
79
Journal Issue
6
Journal Page Range
p. 061903-061903.8
ISSN
1539-3755

INIS

Country of Publication
United States
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
41040354
Subject category
S60: APPLIED LIFE SCIENCES;
Descriptors DEI
ALGEBRA; ASYMPTOTIC SOLUTIONS; BIOPHYSICS; DISTRIBUTION FUNCTIONS; NUCLEOTIDES; PARTITION FUNCTIONS; PERTURBATION THEORY; POLYMERS; RNA
Descriptors DEC
FUNCTIONS; MATHEMATICAL SOLUTIONS; MATHEMATICS; NUCLEIC ACIDS; ORGANIC COMPOUNDS; PHYSICS

Optional Information

Notes
(c) 2009 The American Physical Society