Mechanochemical pattern formation in simple models of active viscoelastic fluids and solids
- 1. Department of Physics, Universitat Politècnica de Catalunya, Av. Dr. Marañon 44-50, 08028 Barcelona (Spain)
- 2. Technische Universität Berlin, Institute for Theoretical Physics, Hardenberstr. 36, 10623 Berlin (Germany)
- 3. Physikalisch-Technische Bundesanstalt, Abbestrasse 2-12, 10587 Berlin (Germany)
Description
The cytoskeleton of the organism Physarum polycephalum is a prominent example of a complex active viscoelastic material wherein stresses induce flows along the organism as a result of the action of molecular motors and their regulation by calcium ions. Experiments in Physarum polycephalum have revealed a rich variety of mechanochemical patterns including standing, traveling and rotating waves that arise from instabilities of spatially homogeneous states without gradients in stresses and resulting flows. Herein, we investigate simple models where an active stress induced by molecular motors is coupled to a model describing the passive viscoelastic properties of the cellular material. Specifically, two models for viscoelastic fluids (Maxwell and Jeffrey model) and two models for viscoelastic solids (Kelvin–Voigt and Standard model) are investigated. Our focus is on the analysis of the conditions that cause destabilization of spatially homogeneous states and the related onset of mechano-chemical waves and patterns. We carry out linear stability analyses and numerical simulations in one spatial dimension for different models. In general, sufficiently strong activity leads to waves and patterns. The primary instability is stationary for all active fluids considered, whereas all active solids have an oscillatory primary instability. All instabilities found are of long-wavelength nature reflecting the conservation of the total calcium concentration in the models studied. (paper)
Availability note (English)
Available from http://dx.doi.org/10.1088/1361-6463/aa8a1dAdditional details
Identifiers
Publishing Information
- Journal Title
- Journal of Physics. D, Applied Physics
- Journal Volume
- 50
- Journal Issue
- 43
- Journal Page Range
- [15 p.]
- ISSN
- 0022-3727
- CODEN
- JPAPBE
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 49010509
- Subject category
- S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
- Descriptors DEI
- CALCIUM IONS; COMPUTERIZED SIMULATION; FLUIDS; INSTABILITY; MICROTUBULES; PHYSARUM; SOLIDS
- Descriptors DEC
- CELL CONSTITUENTS; CHARGED PARTICLES; FUNGI; IONS; PLANTS; SIMULATION