Structural dynamics of N-ethylpropionamide clusters examined by nonlinear infrared spectroscopy
- 1. Beijing National Laboratory for Molecular Sciences, Molecular Reaction Dynamics Laboratory, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190 (China)
- 2. University of Chinese Academy of Sciences, Beijing 100049 (China)
Description
In this work, the structural dynamics of N-ethylpropionamide (NEPA), a model molecule of β-peptides, in four typical solvents (DMSO, CH3CN, CHCl3, and CCl4), were examined using the N—H stretching vibration (or the amide-A mode) as a structural probe. Steady-state and transient infrared spectroscopic methods in combination with quantum chemical computations and molecular dynamics simulations were used. It was found that in these solvents, NEPA exists in different aggregation forms, including monomer, dimer, and oligomers. Hydrogen-bonding interaction and local-solvent environment both affect the amide-A absorption profile and its vibrational relaxation dynamics and also affect the structural dynamics of NEPA. In particular, a correlation between the red-shifted frequency for the NEPA monomer from nonpolar to polar solvent and the vibrational excitation relaxation rate of the N—H stretching mode was observed
Additional details
Identifiers
- DOI
- 10.1063/1.4935579;
Publishing Information
- Journal Title
- Journal of Chemical Physics
- Journal Volume
- 143
- Journal Issue
- 18
- Journal Page Range
- p. 185102-185102.10
- ISSN
- 0021-9606
- CODEN
- JCPSA6
INIS
- Country of Publication
- United States
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 47063374
- Subject category
- S37: INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY;
- Descriptors DEI
- ABSORPTION; ABSORPTION SPECTROSCOPY; ACETONITRILE; AGGLOMERATION; CARBON TETRACHLORIDE; CHLOROFORM; COMPUTERIZED SIMULATION; CORRELATIONS; DIMERS; DMSO; EXCITATION; INFRARED SPECTRA; MOLECULAR DYNAMICS METHOD; MOLECULES; MONOMERS; NONLINEAR PROBLEMS; PEPTIDES; RED SHIFT; SOLVENTS; TRANSIENTS
- Descriptors DEC
- CALCULATION METHODS; CHLORINATED ALIPHATIC HYDROCARBONS; ENERGY-LEVEL TRANSITIONS; HALOGENATED ALIPHATIC HYDROCARBONS; NITRILES; ORGANIC CHLORINE COMPOUNDS; ORGANIC COMPOUNDS; ORGANIC HALOGEN COMPOUNDS; ORGANIC NITROGEN COMPOUNDS; ORGANIC SULFUR COMPOUNDS; PROTEINS; SIMULATION; SORPTION; SPECTRA; SPECTROSCOPY; SULFOXIDES
Optional Information
- Notes
- (c) 2015 AIP Publishing LLC