Purification, crystallization and X-ray crystallographic analysis of Archaeoglobus fulgidus neelaredoxin
Creators
- 1. Instituto de Biologia Experimental e Tecnológica (IBET), Apartado 12, P-2781-901 Oeiras (Portugal)
- 2. Instituto de Tecnologia Química e Biológica, Universidade Nova de Lisboa, Apartado 127, 2781-901 Oeiras (Portugal)
Description
Diffraction-quality crystals of A. fulgidus neelaredoxin have been produced. The expression, purification, crystallization and X-ray crystallographic analysis of A. fulgidus neelaredoxin are reported. Neelaredoxins are a type of superoxide reductase (SOR), which are blue 14 kDa metalloproteins with a catalytic nonhaem iron centre coordinated by four histidines and one cysteine in the ferrous form. Anaerobic organisms such as Archaeoglobus fulgidus, a hyperthermophilic sulfate-reducing archaeon, have developed defence mechanisms against toxic oxygen species in which superoxide reductases play a key role. SOR is responsible for scavenging toxic superoxide anion radicals (O2·−), catalysing the one-electron reduction of superoxide to hydrogen peroxide. Crystals of recombinant A. fulgidus neelaredoxin in the oxidized form (13.7 kDa, 125 residues) were obtained using polyethylene glycol and ammonium sulfate. These crystals diffracted to 1.9 Å resolution and belonged to the tetragonal space group P41212, with unit-cell parameters a = b = 75.72, c = 185.44 Å. Cell-content analysis indicated the presence of a tetramer in the asymmetric unit, with a Matthews coefficient (VM) of 2.36 Å3 Da−1 and an estimated solvent content of 48%. The three-dimensional structure was determined by the MAD method and is currently under refinement
Availability note (English)
Available from http://dx.doi.org/10.1107/S1744309110000916; Available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2833046Additional details
Identifiers
- URL
- http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2833046;
- DOI
- 10.1107/S1744309110000916;
- PII
- S1744309110000916;
Publishing Information
- Journal Title
- Acta Crystallographica. Section F
- Journal Volume
- 66
- Journal Issue
- Pt 3
- Journal Page Range
- p. 316-319
- ISSN
- 1744-3091
- CODEN
- ACSFCL
INIS
- Country of Publication
- United Kingdom
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 46067616
- Subject category
- S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
- Descriptors DEI
- AMMONIUM SULFATES; CHEMICAL ANALYSIS; CRYSTALLIZATION; CRYSTALS; CYSTEINE; DIFFRACTION; ELECTRONS; HISTIDINE; HYDROGEN PEROXIDE; IRON; OXYGEN; REDUCTION; RESOLUTION; SPACE GROUPS
- Descriptors DEC
- AMINO ACIDS; AMMONIUM COMPOUNDS; AZOLES; CARBOXYLIC ACIDS; CHEMICAL REACTIONS; COHERENT SCATTERING; ELEMENTARY PARTICLES; ELEMENTS; FERMIONS; HETEROCYCLIC ACIDS; HETEROCYCLIC COMPOUNDS; HYDROGEN COMPOUNDS; IMIDAZOLES; LEPTONS; METALS; NONMETALS; ORGANIC ACIDS; ORGANIC COMPOUNDS; ORGANIC NITROGEN COMPOUNDS; ORGANIC SULFUR COMPOUNDS; OXYGEN COMPOUNDS; PEROXIDES; PHASE TRANSFORMATIONS; SCATTERING; SULFATES; SULFUR COMPOUNDS; SYMMETRY GROUPS; THIOLS; TRANSITION ELEMENTS
Optional Information
- Copyright
- Copyright (c) International Union of Crystallography 2010
- Notes
- PMCID: PMC2833046; PMID: 20208170; PUBLISHER-ID: fw5245; OAI: oai:pubmedcentral.nih.gov:2833046