Published November 30, 2006 | Version v1
Journal article

Production, purification and preliminary X-ray crystallographic studies of adeno-associated virus serotype 1

  • 1. Department of Biochemistry and Molecular Biology, College of Medicine, University of Florida, Gainesville, FL 32610 (United States)
  • 2. Department of Pediatrics, College of Medicine, University of Florida, Gainesville, FL 32610 (United States)
  • 3. Department of Molecular Genetics and Microbiology, College of Medicine, University of Florida, Gainesville, FL 32610 (United States)

Description

Crystals of baculovirus-expressed adeno-associated virus serotype 1 (AAV1) capsids have been grown in the rhombohedral space group R32 (unit-cell parameters a = 254.7 Å, α = 62.3°) and shown to diffract X-rays to at least 2.5 Å resolution. Crystals of baculovirus-expressed adeno-associated virus serotype 1 (AAV1) capsids have been grown in the rhombohedral space group R32 (unit-cell parameters a = 254.7 Å, α = 62.3°) and shown to diffract X-rays to at least 2.5 Å resolution. The diffraction data were subsequently processed and reduced with an overall Rsym of 12.3% and a completeness of 89.0%. Based on the unit-cell volume, rotation-function and translation-function results and packing considerations, there is one virus capsid (60 viral proteins) per unit cell and there are ten viral proteins per crystallographic asymmetric unit. The AAV1 capsid shares both the twofold and threefold crystallographic symmetry operators. The AAV1 data have been initially phased using a polyalanine model (based on the crystal structure of AAV4) to 4.0 Å resolution and the structure determination and refinement is in progress using tenfold noncrystallographic symmetry electron-density averaging

Availability note (English)

Available from http://dx.doi.org/10.1107/S1744309106048184; Available from http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2225374

Additional details

Publishing Information

Journal Title
Acta Crystallographica. Section F
Journal Volume
62
Journal Issue
Pt 12
Journal Page Range
p. 1271-1274
ISSN
1744-3091
CODEN
ACSFCL

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
46061598
Subject category
S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
Descriptors DEI
CRYSTAL STRUCTURE; CRYSTALS; DENSITY; DIFFRACTION; ELECTRON DENSITY; PROTEINS; RESOLUTION; ROTATION; SPACE GROUPS; STOWING; SYMMETRY
Descriptors DEC
COHERENT SCATTERING; MOTION; ORGANIC COMPOUNDS; PHYSICAL PROPERTIES; SCATTERING; SYMMETRY GROUPS

Optional Information

Copyright
Copyright (c) International Union of Crystallography 2006
Notes
PMCID: PMC2225374; PMID: 17142915; PUBLISHER-ID: pu5162; OAI: oai:pubmedcentral.nih.gov:2225374