Published October 2016 | Version v1
Journal article

CcpNmr AnalysisAssign: a flexible platform for integrated NMR analysis

  • 1. University of Leicester, Department of Molecular and Cell Biology, Leicester Institute for Structural- and Chemical Biology (United Kingdom)
  • 2. University of Cambridge, Department of Biochemistry (United Kingdom)

Description

NMR spectroscopy is an indispensably powerful technique for the analysis of biomolecules under ambient conditions, both for structural- and functional studies. However, in practice the complexity of the technique has often frustrated its application by non-specialists. In this paper, we present CcpNmr version-3, the latest software release from the Collaborative Computational Project for NMR, for all aspects of NMR data analysis, including liquid- and solid-state NMR data. This software has been designed to be simple, functional and flexible, and aims to ensure that routine tasks can be performed in a straightforward manner. We have designed the software according to modern software engineering principles and leveraged the capabilities of modern graphics libraries to simplify a variety of data analysis tasks. We describe the process of backbone assignment as an example of the flexibility and simplicity of implementing workflows, as well as the toolkit used to create the necessary graphics for this workflow. The package can be downloaded from www.ccpn.ac.uk/v3-software/downloads http://www.ccpn.ac.uk/v3-software/downloads and is freely available to all non-profit organisations.

Additional details

Identifiers

Publishing Information

Journal Title
Journal of Biomolecular NMR
Journal Volume
66
Journal Issue
2
Journal Page Range
p. 111-124
ISSN
0925-2738

INIS

Country of Publication
Netherlands
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
48092857
Subject category
S46: INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND TECHNOLOGY;
Descriptors DEI
ALLOCATIONS; COMPUTER CODES; DATA ANALYSIS; DESIGN; FLEXIBILITY; LIBRARIES; LIQUIDS; NUCLEAR MAGNETIC RESONANCE; SPECTROSCOPY
Descriptors DEC
DATA PROCESSING; FLUIDS; MAGNETIC RESONANCE; MECHANICAL PROPERTIES; PROCESSING; RESONANCE; TENSILE PROPERTIES

Optional Information

Copyright
Copyright (c) 2016 The Author(s)