Published October 7, 2012 | Version v1
Journal article

Fast GPU-based computation of the sensitivity matrix for a PET list-mode OSEM algorithm

  • 1. Département de radio-oncologie, Centre hospitalier de l'Université de Montréal (CHUM), Montréal, Québec (Canada)
  • 2. Département de génie informatique et génie logiciel, École polytechnique de Montréal, Montréal, Québec (Canada)
  • 3. Département de radio-oncologie, Centre hospitalier universitaire de Québec (CHUQ), Québec (Canada)

Description

During the last decade, studies have shown that 3D list-mode ordered-subset expectation-maximization (LM-OSEM) algorithms for positron emission tomography (PET) reconstruction could be effectively computed and considerably accelerated by graphics processing unit (GPU) devices. However, most of these studies rely on pre-calculated sensitivity matrices. In many cases, the time required to compute this matrix can be longer than the reconstruction time itself. In fact, the relatively long time required for the calculation of the patient-specific sensitivity matrix is considered as one of the main obstacle in introducing a list-mode PET reconstruction algorithm for routine clinical use. The objective of this work is to accelerate a fully 3D LM-OSEM algorithm, including the calculation of the sensitivity matrix that accounts for the patient-specific attenuation and normalization corrections. For this purpose, sensitivity matrix calculations and list-mode OSEM reconstructions were implemented on GPUs, using the geometry of a commercial PET system. The system matrices were built on-the-fly by using an approach with multiple rays per detector pair. The reconstructions were performed for a volume of 188×188×57 voxels of 2×2×3.15 mm3 and for another volume of 144×144×57 voxels of 4×4×3.15 mm3. The time to compute the sensitivity matrix for the 188×188×57 array was 9 s while the LM-OSEM algorithm performed at a rate of 1.1 millions of events per second. For the 144×144×57 array, the respective numbers are 8 s for the sensitivity matrix and 0.8 million of events per second for the LM-OSEM step. This work lets envision fast reconstructions for advanced PET applications such as real time dynamic studies and parametric image reconstructions. (paper)

Availability note (English)

Available from http://dx.doi.org/10.1088/0031-9155/57/19/6279

Additional details

Identifiers

Publishing Information

Journal Title
Physics in Medicine and Biology
Journal Volume
57
Journal Issue
19
Journal Page Range
p. 6279-6293
ISSN
0031-9155
CODEN
PHMBA7

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
44049832
Subject category
S62: RADIOLOGY AND NUCLEAR MEDICINE;
Descriptors DEI
ALGORITHMS; ATTENUATION; CALCULATION METHODS; IMAGE PROCESSING; PATIENTS; POSITRON COMPUTED TOMOGRAPHY; SENSITIVITY
Descriptors DEC
COMPUTERIZED TOMOGRAPHY; DIAGNOSTIC TECHNIQUES; EMISSION COMPUTED TOMOGRAPHY; MATHEMATICAL LOGIC; PROCESSING; TOMOGRAPHY