Measurement of residual dipolar couplings from 1Hα to 13Cα and 15N using a simple HNCA-based experiment
Creators
- 1. University of Helsinki, NMR Laboratory, Structural Biology and Biophysics Programme, Institute of Biotechnology (Finland)
Description
Novel NMR pulse schemes for simultaneous measurement of 1DCαHαand 2DNHαresidual dipolar couplings in proteins is presented. We show that 2DNHαcoupling can be very useful for protein structure determination. The 2DNHαcoupling can be measured from 15N dimension with good accuracy on a slowly relaxing TROSY resonance, utilizing HNCA-TROSY-based experiments, which concomitantly supply large 1DCαHαcoupling. The dynamic range of 2DNHαcoupling is comparable to 1DNC' coupling, but instead, it also serves non-redundant information on the course of protein backbone, thanks to rotational degree of freedom with respect to peptide bond. The HNCA-TROSY-based experiments are optimal for measuring residual dipolar couplings at high magnetic fields owing to absence of rapid transverse relaxation of carbonyl carbon. The reliability of the proposed approach was tested on 15N/13C human ubiquitin. A very good correlation with ubiquitin solution as well as crystal structure, for both 1DCαHαand 2DNHαcouplings, was obtained
Additional details
Identifiers
Publishing Information
- Journal Title
- Journal of Biomolecular NMR
- Journal Volume
- 27
- Journal Issue
- 4
- Journal Page Range
- p. 341-349
- ISSN
- 0925-2738
INIS
- Country of Publication
- Netherlands
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 39109506
- Subject category
- S60: APPLIED LIFE SCIENCES;
- Descriptors DEI
- ACCURACY; CARBON 13; CARBONYLS; COUPLINGS; CRYSTAL STRUCTURE; DEGREES OF FREEDOM; MAGNETIC FIELDS; NITROGEN 15; NUCLEAR MAGNETIC RESONANCE; PEPTIDES; PROTEIN STRUCTURE
- Descriptors DEC
- CARBON ISOTOPES; EVEN-ODD NUCLEI; ISOTOPES; LIGHT NUCLEI; MAGNETIC RESONANCE; NITROGEN ISOTOPES; NUCLEI; ODD-EVEN NUCLEI; ORGANIC COMPOUNDS; PROTEINS; RESONANCE; STABLE ISOTOPES
Optional Information
- Copyright
- Copyright (c) 2003 Kluwer Academic Publishers