Experimental and theoretical studies on tautomeric structures of a newly synthesized 2,2′(hydrazine-1,2-diylidenebis(propan-1-yl-1-ylidene))diphenol
Creators
- 1. Department of Chemical and Process Engineering, Faculty of Engineering-Architecture, Ahi Evran University, Kirsehir 40100 (Turkey)
- 2. Department of Chemistry, Faculty of Science, Firat University, 23119 Elazig (Turkey)
- 3. Department of Food Engineering, Faculty of Engineering and Architecture, Ahi Evran University, 40100 Kırsehir (Turkey)
- 4. Department of Plant Protection, Faculty of Agriculture, Gaziosmanpaşa Üniversitesi, 60250 Tokat (Turkey)
- 5. Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Biruni University, Istanbul 34010 (Turkey)
- 6. Department of Physics, Faculty of Sciences and Letters, Ahi Evran University, 40100 Kirsehir (Turkey)
- 7. Department of Chemistry, Faculty of Science, Anadolu University, 26470 Eskisehir (Turkey)
Description
Highlights: • FT-IR and NMR spectrum of the title compound was recorded and compared with the theoretical results. • The theoretical calculations were made using DFT/B3LYP/6-311G(d,p) method. • The complete assignments are performed on the basis of the potential energy distribution (PED). • HOMO and LUMO energies were calculated and compared with the tautomer forms. • Molecular docking study was performed of the title compound and compared with the tautomer forms. In the present study, a single crystal of a Schiff base, 2,2′(hydrazine-1,2-diylidenebis(propan-1-yl-1-ylidene))diphenol, was synthesized. The structure of the synthesized crystal was confirmed by 1H and 13C NMR spectroscopic and X-ray diffraction analysis techniques. Experimental and theoretical studies were carried out on two tautomeric structures. It has been observed that the title compound studied can be in two different tautomeric forms, phenol-imine and keto-amine. Theoretical calculations have been performed to support experimental results. Accordingly, the geometric parameters of the compound were optimized by the density functional theory (DFT) method using the Gaussian 09 and Quantum Espresso (QE) packet program was used for periodic boundary conditions (PBC) studies. Furthermore, the compound was also tested for in vitro antifungal activity against Sclerotinia sclerotiorum, Alternaria solani, Fusarium oxysporum f. sp. lycopersici and Monilinia fructigena plant pathogens. Promising inhibition profiles were observed especially towards A. solani. Finally, molecular docking studies and post-docking procedure based on Molecular Mechanics‐Generalized Born Surface Area (MM‐GBSA) were also carried out to get insight into the compound's binding interactions with the potential. Although theoretical calculations showed that the phenol-imine form was more stable, keto-amine form was predicted to have better binding affinity which was concluded to result from loss of rotational entropy in phenol-imine upon binding. The results obtained here from both experimental and computational methods might serve as a potential lead in the development of novel anti-fungal agents.
Availability note (English)
Available from http://dx.doi.org/10.1016/j.cplett.2018.01.016Additional details
Identifiers
- DOI
- 10.1016/j.cplett.2018.01.016;
- PII
- S0009261418300162;
Publishing Information
- Journal Title
- Chemical Physics Letters
- Journal Volume
- 693
- Journal Page Range
- p. 132-145
- ISSN
- 0009-2614
- CODEN
- CHPLBC
INIS
- Country of Publication
- Netherlands
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 54071428
- Subject category
- S74: ATOMIC AND MOLECULAR PHYSICS;
- Descriptors DEI
- BOUNDARY CONDITIONS; CARBON 13; DENSITY FUNCTIONAL METHOD; ENERGY SPECTRA; ENTROPY; FOURIER TRANSFORM SPECTROMETERS; INFRARED SPECTRA; NUCLEAR MAGNETIC RESONANCE; POTENTIAL ENERGY; X-RAY DIFFRACTION
- Descriptors DEC
- CALCULATION METHODS; CARBON ISOTOPES; COHERENT SCATTERING; DIFFRACTION; ENERGY; EVEN-ODD NUCLEI; ISOTOPES; LIGHT NUCLEI; MAGNETIC RESONANCE; MEASURING INSTRUMENTS; NUCLEI; PHYSICAL PROPERTIES; RESONANCE; SCATTERING; SPECTRA; SPECTROMETERS; STABLE ISOTOPES; THERMODYNAMIC PROPERTIES; VARIATIONAL METHODS
Optional Information
- Copyright
- Copyright (c) 2018 Elsevier B.V. All rights reserved.