Measuring 1HN temperature coefficients in invisible protein states by relaxation dispersion NMR spectroscopy
Creators
- 1. University of Toronto, Departments of Molecular Genetics, Biochemistry and Chemistry (Canada)
- 2. The University of Arizona, Department of Chemistry and Biochemistry (United States)
- 3. University College London, Institute of Structural and Molecular Biology (United Kingdom)
Description
A method based on the Carr-Purcell-Meiboom-Gill relaxation dispersion experiment is presented for measuring the temperature coefficients of amide proton chemical shifts of low populated 'invisible' protein states that exchange with a 'visible' ground state on the millisecond time-scale. The utility of the approach is demonstrated with an application to an I58D mutant of the Pfl6 Cro protein that undergoes exchange between the native, folded state and a cold denatured, unfolded conformational ensemble that is populated at a level of 6% at 2.5°C. A wide distribution of amide temperature coefficients is measured for the unfolded state. The distribution is centered about –5.6 ppb/K, consistent with an absence of intra-molecular hydrogen bonds, on average. However, the large range of values (standard deviation of 2.1 ppb/K) strongly supports the notion that the unfolded state of the protein is not a true random coil polypeptide chain.
Additional details
Identifiers
Publishing Information
- Journal Title
- Journal of Biomolecular NMR
- Journal Volume
- 50
- Journal Issue
- 1
- Journal Page Range
- p. 13-18
- ISSN
- 0925-2738
INIS
- Country of Publication
- Netherlands
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 43093911
- Subject category
- S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
- Descriptors DEI
- DISPERSIONS; DISTRIBUTION; GROUND STATES; HYDROGEN; MUTANTS; NUCLEAR MAGNETIC RESONANCE; POLYPEPTIDES; PROTONS; RELAXATION; SPECTROSCOPY; TEMPERATURE COEFFICIENT
- Descriptors DEC
- BARYONS; ELEMENTARY PARTICLES; ELEMENTS; ENERGY LEVELS; FERMIONS; HADRONS; MAGNETIC RESONANCE; NONMETALS; NUCLEONS; ORGANIC COMPOUNDS; PEPTIDES; PROTEINS; REACTIVITY COEFFICIENTS; RESONANCE
Optional Information
- Copyright
- Copyright (c) 2011 Springer Science+Business Media B.V.