Published May 2011 | Version v1
Journal article

Measuring 1HN temperature coefficients in invisible protein states by relaxation dispersion NMR spectroscopy

  • 1. University of Toronto, Departments of Molecular Genetics, Biochemistry and Chemistry (Canada)
  • 2. The University of Arizona, Department of Chemistry and Biochemistry (United States)
  • 3. University College London, Institute of Structural and Molecular Biology (United Kingdom)

Description

A method based on the Carr-Purcell-Meiboom-Gill relaxation dispersion experiment is presented for measuring the temperature coefficients of amide proton chemical shifts of low populated 'invisible' protein states that exchange with a 'visible' ground state on the millisecond time-scale. The utility of the approach is demonstrated with an application to an I58D mutant of the Pfl6 Cro protein that undergoes exchange between the native, folded state and a cold denatured, unfolded conformational ensemble that is populated at a level of 6% at 2.5°C. A wide distribution of amide temperature coefficients is measured for the unfolded state. The distribution is centered about –5.6 ppb/K, consistent with an absence of intra-molecular hydrogen bonds, on average. However, the large range of values (standard deviation of 2.1 ppb/K) strongly supports the notion that the unfolded state of the protein is not a true random coil polypeptide chain.

Additional details

Identifiers

Publishing Information

Journal Title
Journal of Biomolecular NMR
Journal Volume
50
Journal Issue
1
Journal Page Range
p. 13-18
ISSN
0925-2738

Optional Information

Copyright
Copyright (c) 2011 Springer Science+Business Media B.V.