Published February 1, 2013 | Version v1
Journal article

Development of a method to accurately calculate the Dpb and quickly predict the strength of a chemical bond

  • 1. Chemistry and Chemical Engineering Faculty, Liaoning Normal University, Dalian 116029 (China)

Description

Highlights: ► A method from new respect to characterize and measure the bond strength is proposed. ► We calculate the Dpb of a series of various bonds to justify our approach. ► A quite good linear relationship of the Dpb with the bond lengths for series of various bonds is shown. ► Take the prediction of strengths of C–H and N–H bonds for base pairs in DNA as a practical application of our method. - Abstract: A new approach to characterize and measure bond strength has been developed. First, we propose a method to accurately calculate the potential acting on an electron in a molecule (PAEM) at the saddle point along a chemical bond in situ, denoted by Dpb. Then, a direct method to quickly evaluate bond strength is established. We choose some familiar molecules as models for benchmarking this method. As a practical application, the Dpb of base pairs in DNA along C–H and N–H bonds are obtained for the first time. All results show that C7–H of A–T and C8–H of G–C are the relatively weak bonds that are the injured positions in DNA damage. The significance of this work is twofold: (i) A method is developed to calculate Dpb of various sizable molecules in situ quickly and accurately; (ii) This work demonstrates the feasibility to quickly predict the bond strength in macromolecules

Availability note (English)

Available from http://dx.doi.org/10.1016/j.chemphys.2012.12.016

Additional details

Identifiers

DOI
10.1016/j.chemphys.2012.12.016;
PII
S0301-0104(12)00467-3;

Publishing Information

Journal Title
Chemical Physics
Journal Volume
412
Journal Page Range
p. 84-91
ISSN
0301-0104
CODEN
CMPHC2

INIS

Country of Publication
Netherlands
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
45098384
Subject category
S37: INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY;
Descriptors DEI
BOND LENGTHS; CHEMICAL BONDS; DISSOCIATION ENERGY; DNA; DNA DAMAGES; ELECTRONS; MOLECULES
Descriptors DEC
DIMENSIONS; ELEMENTARY PARTICLES; ENERGY; FERMIONS; LENGTH; LEPTONS; NUCLEIC ACIDS; ORGANIC COMPOUNDS

Optional Information

Copyright
Copyright (c) 2012 Elsevier Science B.V., Amsterdam, The Netherlands, All rights reserved.