The solid-state and solution-state reassigned structures of tagitinin A, a 3,10-epoxy-germacrolide from Tithonia diversifolia, and the interconversion of 3,10-epoxy-germacrolide conformational families via a ring-atom flip mechanism
- 1. Ben-Gurion University of the Negev (Israel). Dept. of Chemistry
- 2. Universidad Nacional Autonoma de Mexico, Mexico, D.F. (Mexico). Inst. de Quimica
Description
Tagitinin A (2), a known 3,10-epoxy-germacrolide-6,7-trans-lactone isolated from Tithonia diversifolia, was investigated by single crystal X-ray diffraction analysis. It was found to have a 1β,4α,6α,7β,8β relative configuration which differed at C(1) from the 1a-orientation originally reported in the literature which was determined by Horeau's Rule. Analysis of the 1H NMR spectrum of 2 shows the molecule to maintain its crystallographically observed twist-chair-boat (TCB) nine-membered ring conformation in acetone-d6 solution. The twist-chair-boat/skew-chair-boat type 3 conformations of saturated/unsaturated nine-membered rings within 3,10-epoxy-germacrolides can be interconverted to the skew-chair-chair (SCC) conformation by means of a C(9) ring atom flip mechanism. As a result of this conformational change, the orientation of the C(1) atom and the C(8)-oxycarbonyl moiety are transformed from diequatorial to diaxial. The reported stereochemistry of 3,10-epoxy-germacrolide lactone structures, and the DFT B3LYP/6-31g(d) modeling findings in this work indicate that tetrahedral C(1) atoms stabilize the TCB/SCB type 3 conformations, while their trigonal counterparts stabilize the SCC conformation. (author)
Availability note (English)
Available from http://www.scielo.br/pdf/jbchs/v16n3a/a19v16n3a.pdfAdditional details
Identifiers
Publishing Information
- Journal Title
- Journal of the Brazilian Chemical Society
- Journal Volume
- 16
- Journal Issue
- 3A
- Journal Page Range
- p. 440-448
- ISSN
- 0103-5053
- CODEN
- JOCSET
INIS
- Country of Publication
- Brazil
- Country of Input or Organization
- Brazil
- INIS RN
- 38093425
- Subject category
- S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY; S37: INORGANIC, ORGANIC, PHYSICAL AND ANALYTICAL CHEMISTRY;
- Descriptors DEI
- CARBON 13; CARBONYLS; CONFORMATIONAL CHANGES; EPOXIDES; FURANS; HEXANE; HYDROGEN 1; LACTONES; METHYLENE CHLORIDE; METHYLENE RADICALS; NMR SPECTRA; STRUCTURAL CHEMICAL ANALYSIS; X-RAY DIFFRACTION
- Descriptors DEC
- ALKANES; CARBON ISOTOPES; COHERENT SCATTERING; DIFFRACTION; ESTERS; EVEN-ODD NUCLEI; HETEROCYCLIC COMPOUNDS; HYDROCARBONS; HYDROGEN ISOTOPES; ISOTOPES; LIGHT NUCLEI; NUCLEI; ODD-EVEN NUCLEI; ORGANIC CHLORINE COMPOUNDS; ORGANIC COMPOUNDS; ORGANIC HALOGEN COMPOUNDS; ORGANIC OXYGEN COMPOUNDS; RADICALS; SCATTERING; SPECTRA; STABLE ISOTOPES
Optional Information
- Notes
- 48 refs., figs., 1 tab., 20 schemes