Temperature dependence of the mean square displacement (MSD) of protein obtained from the incoherent neutron scattering
Creators
- 1. Professor Emeritus, Institute for Molecular Science, Okazaki, Aichi (Japan)
- 2. Toyota Physical and Chemical Research Institute, Nagakute, Aichi (Japan)
Description
A variety of models and hypothesis have been proposed to interpreted the temperature dependence of the mean square displacement (MSD) of protein, that is obtained from the neutron scattering measurement, but a consensus seems yet to be achieved. The most controversial point is concerned with the physics behind the abrupt change of gradient of MSD plotted against temperature. The phenomenon is attributed to different physics by different authors, such as glass transition, alpha to bete transition, harmonic to anharmonic transition, coupling of protein and hydrated-water dynamics, and so forth. In this report, we propose a theory to analyse the elastic incoherent neutron scattering (EINS) data of aqueous solutions of protein, based on the generalized Langevin theory combined with the 3D-RISM/RISM equation. The theory gives closed equations for the elastic incoherent structure factor (EISF) and MSD as a function of temperature. Based on the theory, the abrupt change of the gradient of MSD in the temperature dependence is interpreted as an onset of 'solvent-induced elasticity,' or 'free energy elasticity,' with increasing temperature. (author)
Availability note (English)
Available from https://www.toyotariken.jp/wp-content/uploads/report72_f3_hirata-1-1.pdfAbstract (Japanese)
タンパク質の構造揺らぎを直接検出する実験的方法のひとつに「非干渉性中性子散乱」実験がある。この実験から得られるタンパク質の平均自乗変位(揺らぎの大きさ)を温度に対してプロットすると直線になるが、その傾きが約230K付近で不連続的に大きくなる。この現象に対して「ガラス転移」、「線形−非線形転移」など様々な物理的解釈が与えられているが、未だ共通の物理的描像は得られていない。本フェローは本研究においてタンパク質の構造揺らぎに関する統計力学理論を開発しているが、この理論に基づいて上記の現象に対する一般的物理描像を与えることができたので報告する。(著者)Additional details
Additional titles
- Original title (Japanese)
- 中性子の非干渉性散乱実験から得られるタンパク質の平均自乗変位の温度依存性に関する統計力学理論
Publishing Information
- Journal Title
- Toyota kenkyu hokoku (Online)
- Journal Issue
- no.72
- Series
- 雑誌名:豊田研究報告; Reports of Toyota Physical and Chemical Research Institute
- Journal Page Range
- p. 41-43
- ISSN
- 2189-4310
INIS
- Country of Publication
- Japan
- Country of Input or Organization
- Japan
- INIS RN
- 53025736
- Subject category
- S60: APPLIED LIFE SCIENCES;
- Descriptors DEI
- AMINO ACIDS; DISTRIBUTION FUNCTIONS; ELASTICITY; FREE ENERGY; GAUSS FUNCTION; INCOHERENT SCATTERING; LANGEVIN EQUATION; NEUTRONS; PROTEIN STRUCTURE; PROTEINS; STATISTICAL MECHANICS; STRAINS; STRUCTURE FACTORS; TEMPERATURE DEPENDENCE; YOUNG MODULUS
- Descriptors DEC
- BARYONS; CARBOXYLIC ACIDS; DIMENSIONLESS NUMBERS; ELEMENTARY PARTICLES; ENERGY; EQUATIONS; FERMIONS; FUNCTIONS; HADRONS; MECHANICAL PROPERTIES; MECHANICS; NUCLEONS; ORGANIC ACIDS; ORGANIC COMPOUNDS; PHYSICAL PROPERTIES; SCATTERING; THERMODYNAMIC PROPERTIES
Optional Information
- Notes
- 4 refs., 2 figs.