Published August 15, 2012 | Version v1
Journal article

Effects of an attractive wall on the translocation of polymer under driving

  • 1. Department of Physics, Zhejiang University, Hangzhou 310027 (China)

Description

The effects of an attractive wall at the trans side on the translocation of an eight-site bond-fluctuation model (BFM) polymer through a pore in a membrane under driving are simulated by the dynamic Monte Carlo method. The attractive wall shows two contrary effects: its excluded volume effect reduces configuration entropy and thus hinders the translocation of the polymer, while its attraction decreases the energy and thus accelerates the translocation. At a critical polymer-wall interaction ε* ≈- 1, we find that the two effects compensate each other and the translocation time τ is roughly independent of the separation distance between the wall and the pore. The value ε* ≈- 1 is roughly equal to the critical adsorption point for the BFM polymer. Moreover, the value of the critical attraction is roughly independent of chain length N and chemical potential difference Δμ. At last, a scaling relation τ ∼ Nα is observed for polymer translocation at a high value of NΔμ. Though the translocation time is highly dependent on the polymer-wall interaction and pore-wall separation distance, the exponent α is always about 1.30 ± 0.05 so long as NΔμ is large enough. (paper)

Availability note (English)

Available from http://dx.doi.org/10.1088/0953-8984/24/32/325104

Additional details

Publishing Information

Journal Title
Journal of Physics. Condensed Matter
Journal Volume
24
Journal Issue
32
Journal Page Range
[8 p.]
ISSN
0953-8984
CODEN
JCOMEL

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
43100147
Subject category
S75: CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND SUPERFLUIDITY;
Descriptors DEI
ADSORPTION; CONFIGURATION; ENTROPY; FLUCTUATIONS; INTERACTIONS; MEMBRANES; MONTE CARLO METHOD; POLYMERS; SCALING; SIMULATION; TRANSLOCATION
Descriptors DEC
CALCULATION METHODS; PHYSICAL PROPERTIES; SORPTION; THERMODYNAMIC PROPERTIES; VARIATIONS