Divide and conquer is always best: sensitivity of methyl correlation experiments
- 1. Carnegie Mellon University, Department of Biological Sciences (United States)
- 2. University of Pittsburgh, Department of Biological Sciences (United States)
Description
The HMCM [CG]CBCA experiment (Tugarinov and Kay in J Am Chem Soc 125:13868–13878, 2003) correlates methyl carbon and proton shifts to Cγ, Cβ, and Cα resonances for the purpose of resonance assignments. The relative sensitivity of the HMCM[CG]CBCA sequence experiment is compared to a divide-and-conquer approach to assess whether it is best to collect all of the methyl correlations at once, or to perform separate experiments for each correlation. A straightforward analysis shows that the divide-and-conquer approach is intrinsically more sensitive, and should always be used to obtain methyl-Cγ, Cβ, and Cα correlations. The improvement in signal-to-noise associated with separate experiments is illustrated by the detection of methyl-aliphatic correlations in a 65 kDa protein-DNA complex
Additional details
Identifiers
Publishing Information
- Journal Title
- Journal of Biomolecular NMR
- Journal Volume
- 56
- Journal Issue
- 4
- Journal Page Range
- p. 331-335
- ISSN
- 0925-2738
INIS
- Country of Publication
- Netherlands
- Country of Input or Organization
- International Atomic Energy Agency (IAEA)
- INIS RN
- 45028142
- Subject category
- S60: APPLIED LIFE SCIENCES;
- Descriptors DEI
- ALLOCATIONS; CARBON; COMPARATIVE EVALUATIONS; CORRELATIONS; DNA; NMR SPECTRA; PROTEINS; PROTONS; SENSITIVITY
- Descriptors DEC
- BARYONS; ELEMENTARY PARTICLES; ELEMENTS; EVALUATION; FERMIONS; HADRONS; NONMETALS; NUCLEIC ACIDS; NUCLEONS; ORGANIC COMPOUNDS; SPECTRA
Optional Information
- Copyright
- Copyright (c) 2013 Springer Science+Business Media Dordrecht