Published November 1, 2019 | Version v1
Journal article

Faster PET reconstruction with non-smooth priors by randomization and preconditioning

  • 1. Institute for Mathematical Innovation, University of Bath, Bath BA2 7JU (United Kingdom)
  • 2. Centre for Medical Image Computing, University College London, London WC1E 6BT (United Kingdom)
  • 3. Department for Applied Mathematics and Theoretical Physics, University of Cambridge, Cambridge CB3 0WA (United Kingdom)

Description

Uncompressed clinical data from modern positron emission tomography (PET) scanners are very large, exceeding 350 million data points (projection bins). The last decades have seen tremendous advancements in mathematical imaging tools many of which lead to non-smooth (i.e. non-differentiable) optimization problems which are much harder to solve than smooth optimization problems. Most of these tools have not been translated to clinical PET data, as the state-of-the-art algorithms for non-smooth problems do not scale well to large data. In this work, inspired by big data machine learning applications, we use advanced randomized optimization algorithms to solve the PET reconstruction problem for a very large class of non-smooth priors which includes for example total variation, total generalized variation, directional total variation and various different physical constraints. The proposed algorithm randomly uses subsets of the data and only updates the variables associated with these. While this idea often leads to divergent algorithms, we show that the proposed algorithm does indeed converge for any proper subset selection. Numerically, we show on real PET data (FDG and florbetapir) from a Siemens Biograph mMR that about ten projections and backprojections are sufficient to solve the MAP optimisation problem related to many popular non-smooth priors; thus showing that the proposed algorithm is fast enough to bring these models into routine clinical practice. (paper)

Availability note (English)

Available from http://dx.doi.org/10.1088/1361-6560/ab3d07

Additional details

Identifiers

Publishing Information

Journal Title
Physics in Medicine and Biology
Journal Volume
64
Journal Issue
22
Journal Page Range
[17 p.]
ISSN
0031-9155
CODEN
PHMBA7

INIS

Country of Publication
United Kingdom
Country of Input or Organization
International Atomic Energy Agency (IAEA)
INIS RN
52004128
Subject category
S62: RADIOLOGY AND NUCLEAR MEDICINE;
Descriptors DEI
NUCLEAR INDUSTRY; OPTIMIZATION; POSITRON COMPUTED TOMOGRAPHY
Descriptors DEC
COMPUTERIZED TOMOGRAPHY; DIAGNOSTIC TECHNIQUES; EMISSION COMPUTED TOMOGRAPHY; INDUSTRY; TOMOGRAPHY