Published May 2005
| Version v1
Journal article
Gel Electrophoresis of DNA - New Measurements and the Repton Model at High Fields
- 1. Faculty of Physics and Applied Computer Science, AGH - University of Science and Technology, Cracow (Poland)
- 2. Faculty of Biotechnology, Jagellonian University, Cracow (Poland)
Description
New experimental data are presented on the gel electrophoresis of DNA. Experiment was made for molecules of length 173 kbp, in 1 percent agarose gel, in TAE 1 x buffer and the field intensity between 5 and 9 V/cm. The results are compared with our computer simulations, performed within the repton model of Duke and Rubinstein. The ranges of field and molecule length are determined, where the geometration effect appears. We investigate also the field dependence of the velocity and the diffusion coefficient at the border of the geometration regime. (author)
Availability note (English)
Also available at http://th-www.if.uj.edu.pl/acta/Additional details
Additional titles
- Augmented title (English)
- PACS numbers: 87.15.Tt, 05.10.Ln, 83.10.Kn
Identifiers
Publishing Information
- Journal Title
- Acta Physica Polonica. Series B
- Journal Volume
- B36
- Journal Issue
- 5
- Journal Page Range
- p. 1653-1662
- ISSN
- 0587-4254
Conference
- Title
- 17. Marian Smoluchowski Symposium on Statistical Physics
- Dates
- 4-9 Sep 2004
- Place
- Zakopane (Poland)
INIS
- Country of Publication
- Poland
- Country of Input or Organization
- Poland
- INIS RN
- 36060397
- Subject category
- S71: CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSICS;
- Resource subtype / Literary indicator
- Conference
- Descriptors DEI
- AGAR; COMPUTERIZED SIMULATION; DIFFUSION; DNA; ELECTRIC FIELDS; ELECTROPHORESIS; GELS; MEASURING METHODS; MONTE CARLO METHOD; SOLUTIONS
- Descriptors DEC
- CALCULATION METHODS; CARBOHYDRATES; COLLOIDS; DISPERSIONS; HOMOGENEOUS MIXTURES; MIXTURES; NUCLEIC ACIDS; ORGANIC COMPOUNDS; POLYSACCHARIDES; SACCHARIDES; SIMULATION
Optional Information
- Notes
- 14 refs., 9 figs.